Solanum tuberosum (potato): 102600939
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Entry
102600939 CDS
T02981
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102600939
09123 Folding, sorting and degradation
03018 RNA degradation
102600939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102600939
03041 Spliceosome [BR:
sot03041
]
102600939
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102600939
mRNA degradation factors
5'-3' decay
Lsm complex
102600939
Spliceosome [BR:
sot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102600939
Complex C
U2 snRNP components
102600939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
Motif
Other DBs
NCBI-GeneID:
102600939
NCBI-ProteinID:
XP_006352785
LinkDB
All DBs
Position
Un
AA seq
93 aa
AA seq
DB search
MLFFSYFKDMVGREVTVELKNDLAIRGILHSVDQYLNIKLENTSVVDEDKYPHMRSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttctcatacttcaaggacatggtgggcagagaagtgacagtggaactgaag
aatgatttggctatccgaggcatactccattcagtcgatcagtatctcaacattaagctc
gaaaacacaagtgtcgttgatgaagacaagtaccctcacatgcgttcggtgaggaactgc
ttcatcagaggatcagtggtgagatacgtccagttacctccagatggagtcgacatagag
ctgcttcatgatgctacgaggagagaagctcgtggtggctaa
DBGET
integrated database retrieval system