KEGG   Solanum tuberosum (potato): 102601072
Entry
102601072         CDS       T02981                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sot03041]
    102601072
Spliceosome [BR:sot03041]
 Complex B
  Other components
   Complex B specific factors
    102601072
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML LisH_TPL ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_RIG_2nd Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_VPS8 DUF7165 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st VPS8_N Mala_s_1-like Beta-prop_LRRK2 Beta-prop_IFT122_2nd Beta-prop_IP5PC_F zf_topless
Other DBs
NCBI-GeneID: 102601072
NCBI-ProteinID: XP_006356514
UniProt: M1A2M3
LinkDB
Position
Un
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQSFQTLQNECQVSLNTVDSLETFIADINSGRWDA
VLPQVAQLKLPRKILEDLYEQIVLEMIELREMDTARAILRQTNVMGVMKQEQPERYLRLE
HLLVRTYFDPHEAYNDSTKEKRRAQISQALSAEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEDMYPTTLGHTIKFGKKSHPECSRFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSLVFSRDGTQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTF
DGSRVITASSDGSVKVWDAKTTECLQTFRPPPPLRGGDASVNSVHLFPKNTDHIIVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCVGEDRNLYCFSYQSNKLEHL
MKVHEKDVIGITHHPHINLVATYGEDCTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcttctacactcgaaatcgaagctcgagatgtcattaagatagttcttcaattctgc
aaggagaactctctgcatcaatctttccagacattgcaaaatgagtgccaggtttctctt
aatactgtggatagccttgaaacctttatagctgatattaatagtggaagatgggatgca
gtactacctcaagttgcacaacttaagcttcctagaaagatactggaggatttatatgag
cagattgtcttagaaatgattgaacttcgagagatggatactgcacgagctattttaagg
caaaccaacgtgatgggtgtcatgaaacaggagcaaccagaaagatatttgcggctcgag
catctactagtccggacttacttcgatcctcatgaggcttataatgactcaaccaaggag
aaaaggcgtgcccaaatttcccaagcactttctgctgaggtttctgttgttccaccatca
cgcttaatggctttgattggtcaagccttaaaatggcaacagcatcaaggtttacttcca
cctggaacacagtttgatctattccgaggaacagctgctatgaaacaagatgaagaggat
atgtatccgacaacacttggtcacactattaagtttggtaagaagagtcatccagaatgt
tctaggttctcaccggatggacaatttcttgtctcatgctcagttgatggatttattgag
gtctgggatcacataagtggaaaactgaagaaggatcttcaatatcaggctgatgaaact
tttatgatgcatgatgatgctgtcctttgtgttgattttagcagagactcggagatgctt
gcgtctgggtcacaagatggaaaaataaaggtctggcgcataaggactggtcagtgcttg
cgtcgccttgaacgtgcacattctcagggtgtcactagtcttgtcttctctcgagatgga
actcagatcttaagcacatcctttgacagcacagcgagaattcatggcctgaagtcaggt
aaattgttaaaagaattccgcggacattcatcttatgtgaatgatgccatctttaccttt
gatggatctcgagtcatcaccgcatctagtgacggctcagtgaaggtctgggatgccaaa
actacagagtgtttgcagacatttagaccacctcctcctttaaggggtggcgatgcatct
gtgaattctgtccatcttttccctaagaatactgatcacattatagtgtgcaataagaca
tcatctatttatctgatgacacttcaaggacaggtcgtcaaaagtttctcatctggtaaa
agagaaggtggagactttgtggctgcatgtctatcaccaaaaggagaatggatatactgt
gtaggtgaagacagaaacttgtactgctttagttatcaatcaaacaaactggagcatctg
atgaaggtacatgaaaaggatgtaattggtatcactcaccatccccatataaaccttgtt
gccacctatggagaagactgcaccatgaagctatggaagccttaa

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