Solanum tuberosum (potato): 102601193
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Entry
102601193 CDS
T02981
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sot01009
]
102601193
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102601193
03041 Spliceosome [BR:
sot03041
]
102601193
Protein phosphatases and associated proteins [BR:
sot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102601193
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102601193
Spliceosome [BR:
sot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102601193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Nup35_RRM
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
102601193
NCBI-ProteinID:
XP_006338591
UniProt:
M1AY33
LinkDB
All DBs
Position
Un
AA seq
860 aa
AA seq
DB search
MELKASSPKPVFSTSDCDSDPEEKEISDDDDRNHKHRRKETRSQSAETGALEPVLSRPFR
KRNKPFENGHPYQEGDSHWGDTRFGKRRGMGSFARTPSDSYQRMRLNQSVSGHAGPGRGR
GRESGAWGPCESRFGSIDIASQLVPPLLYTGRGLQNVSSGQSLSWNAFGMVPGMPNGGLD
TLHALGLQGTLRTALNPAMSMGIPRQMCRDFEERGFCLRGDMCPLEHGVNRIVVEDVQSL
SQFNLPIAHMLGPNTAQGSLPAIGPSSSSASGKSLHSKSINPSVIDGGLGMTDTFGGGSV
AGGADFYDPDQPLWSNDHPVTSTALLDVNQSKIDDMGPLLNADSSVRNQAGLYDGCKLEP
IDRGAGTASGSQSVWGRMTRSKNKFEPFSSSQGITRHSKQTNVDTIDQQVLESSSEPQSS
SGRNMRNPSQKALRSLFVRGIPQKDNKPEALLSHFKKFGEVIDIYIPVNGEQAFVQFSKR
EEAEAALKAPDAVMGNRFIKLFWANRDSIMDDGVHGSSNLPRGGTPSTVPPHLSVPHKRR
DNLQTVSPKPAENGVVPVATSDLPKPVAKNGPKTTPALQKKLGTLELLKEEMRKKQEMLE
QKRNDFRRKLDKLEKQAVGVKDEAVPDQSVKKPKGGGKGSNSGEVESSSPAEPSNAVSSP
HAKATPFSSRTTENAEPSCSKSSSLVAAKEASNLKQSIRPLAPVGAPFILNRYKLDNRPT
TFKILPPLPSGLANVDVLKEHFSTFGDLLSVELEDLEPQDCNNGSEVLNTSARISFRSRR
SAERAYLNGKCWQDQTLHFMWLQSSNSAKGIGVGENVTPASKQSSDVNGQSIANSCLAGS
QEGSGAGNGEPENQERREKE
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaagcttcatctccaaagccggtattttcaacttctgattgcgacagtgat
cccgaggagaaagaaattagtgatgacgatgatcgtaatcataagcatcgtagaaaggaa
acacgttcacagtctgcagagacaggggctcttgaacctgttttgagtagaccattcagg
aaaaggaacaagccgtttgaaaatggacatccgtaccaggaaggagattctcactggggt
gatactaggtttggtaaaagacgaggaatgggttcttttgccaggacaccttctgattca
tatcagaggatgaggctaaatcagtccgtttctggtcatgctggtcctggtaggggtcga
ggaagagaatctggtgcttggggtccctgtgaatctaggttcggctctattgatattgca
tctcaattggtgccacctcttctttatactggaagggggctgcaaaatgtttctagcgga
cagagtttgtcttggaatgcatttggaatggttccaggaatgcccaatggagggcttgat
acacttcatgcccttggtttacagggaacactccggacagccttgaatcctgccatgagt
atgggaattccaaggcaaatgtgtagagacttcgaggagcgtggattttgcctaagagga
gatatgtgcccactggagcatggagtaaatcgtatcgttgttgaagatgttcagagcctt
tctcagtttaatcttcccattgctcatatgctgggaccaaatactgcacaaggatcttta
cccgcaataggcccctctagctcatcagctagtggaaaatctttacatagcaaaagtatc
aacccttcagtgattgacggtggattaggtatgactgatacttttggtggtggttctgtg
gctgggggagctgatttctatgatccagatcagcctttatggtcaaatgatcatcctgta
acttcaacagcactcttggatgtcaatcagtctaaaattgatgacatggggcctttgctg
aatgctgactcctctgttcggaatcaggctgggctttatgatggctgtaaactcgagcct
atagatagaggtgccggaacagcttcaggatctcaaagtgtgtggggaagaatgactcgt
tcaaaaaataagtttgaaccattcagtagcagtcagggtataacccgtcatagtaagcaa
acaaatgtagataccatagaccagcaagtgctggaatcatcttcagagccccaaagtagt
tctggacgcaatatgcgaaacccatctcaaaaggcactgcgtagtctatttgtaagaggg
attcctcaaaaggacaacaaaccagaagctcttctttcacattttaaaaaattcggtgag
gttatcgacatctacatcccagtaaatggtgaacaagcctttgttcaattttctaagagg
gaggaagctgaggctgctttaaaagcaccagatgctgtgatgggaaaccgctttataaag
cttttctgggcaaacagggatagcattatggatgatggagtacatggtagtagtaattta
ccccgcggtgggacccctagtacagttccaccccatctatccgttcctcataaaagaaga
gacaatctgcagactgtatcccccaaacctgctgaaaatggtgttgttccagtagccacc
tctgatctccccaagcctgtggctaagaatggtcccaaaactacaccagctttgcaaaaa
aagctgggaactttagagcttctgaaggaagaaatgcgcaagaagcaggaaatgcttgag
cagaagcggaatgacttccgacgcaagttggacaagcttgagaagcaagccgtgggtgtg
aaagatgaggcagtgccagatcagtctgtgaagaaaccaaagggaggaggaaaaggttcc
aactctggtgaagtggaaagttcaagccctgcagaacctagtaatgctgtgtcatcacca
catgccaaagcaacaccatttagtagcagaactacagagaatgcagagcccagttgttcc
aagtcatcttcgcttgtcgcagcgaaggaagcttcaaacttgaagcagtcgatccgtcca
ttggcaccagttggcgcaccgtttatcttaaatagatacaaactagataaccgacccacc
acattcaagatccttccacctctgccaagtggtctggcaaatgttgacgtcctgaaggaa
cacttttctacatttggtgatcttctgtctgttgagctggaagatttagaacctcaagat
tgtaataatggctcagaggtgctaaatacatctgctaggatatcttttcgatcacgccgg
tctgctgaaagagcatatttgaatggtaaatgctggcaagaccaaactctgcattttatg
tggttgcaatccagtaattccgcaaagggtattggtgttggagaaaatgtcactccagct
tcaaagcagtcttcagatgttaatgggcaatccattgcaaacagttgtctggctggttcc
caggaaggaagcggggcagggaatggtgaacctgaaaatcaagaaagaagagaaaaagaa
tga
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