KEGG   Solanum tuberosum (potato): 102601289
Entry
102601289         CDS       T02981                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 1
  KO
K11797  PH-interacting protein
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sot04121]
    102601289
Ubiquitin system [BR:sot04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     102601289
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Bromodomain Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Auxin_resp VPS8_N WD_LRWD1 Agenet Beta-prop_SPT8
Other DBs
NCBI-GeneID: 102601289
NCBI-ProteinID: XP_006355386
LinkDB
Position
Un
AA seq 1698 aa
MSFRKYILPCDAPSGSMKSLNISGKANQNSQPSDPQRSTEADVDIDMGEVYFLIMHFLSA
GQCHRTYGQFWNELLEHQLLPRRYHAWYSRSGAPSGDENDDGRSFPLSYNRLVERYSHVG
KDHLVKLLKQLLLSVKAPPLGMVGGNTINAAAVPTLLGTGSFSLLSSDQDQRNDEVKPPG
HLRWPHMLADQLRGLSLREIGGGFSKHHRAPSIRAACYAIAKPSTMVQKMQNIKKVRGHR
NAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVNSNNTLVASA
SNDCIVRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSSIYQLLSSSDDGTCRIWDARYSQ
FNPRLYIPKPPETVAGKNTGPSSSTVLQSHQIFCCAFNNSGTFFVTGSSDTCARVWNACK
SNSDDSEQPNHEIEILSGHENDVNYVQFSGCAAASRFSSTDASKEDCGPKFKNSWFNHDN
IVTCSRDGSAIIWIPRSRRSHGKGGRWQKAYHLKVPPPPMPPQPPRGGPRQRILPTPRGV
NMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTESTYVLDVHPSNPRIAMSAGY
DGKTIVWDIWEGAPIRTYEIGRFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGESQQDA
KYDQFFLGDYRPVVQDTNGNVLDQETQLAPYRRNMQDLLCDAGMIPYPEPYQSMYQRRRL
GALGIEWRPSSFRFSIGTDFNMDQPYQTFPIIDLEMLIEPLPGFVDAMDWEPEIEIQSDE
SDSEYHVTEEYSSGKEHGSFCSDASANPENSDEDSEAEDNQKDALRRSRRKKQKEAEVMT
SSGRRVKRKNLDECDNSSHRINHSRKSRHGRKAKKKSSSKSLRPQRAAARNALHLFSRIT
GTSTEGEDEYGSESDSSDSESTLQDSNNGNEDSDMSLSSERHGHSKGKEICVDHSDETNK
LQPFPNSNLNGGIRRRLVLKLPNRDSSKYGPPMNYKPGLAGPSLAPEEGAEISQNYFGCE
DYNLSDANGDIREKSEIDQPTKIENHLDLLEGCKDGNIKWGGVKSRSTKRSRMGELFPSG
SETGPSSFADGNILKENVVNGHPMLEKENHSVPPCSGIQNETNGIIHVNENHCQDSMQET
ENVKLLDGTDSDHPCKQNATPVPMRLRIRSKTLFGHPDNCDMIDAKTSLEDSGCTACDTV
SECQDTEKVLSSEAPTEEDSRTPTLDDGDREKKLDADNIGGSSGTELQVPQPVRSHDMFT
AVYRRSKFGRSRSGRESVSGSMEATTSNVGSHRLAEGSEAFIEGVRRTRSIRLRPTTCDV
NPAHNNDRFVQSHDGSEGTSVEKTAGNNDDESSFEEKLLGSASSVGLRSTRTRRASYSAR
EPSPPDRKKSYQAAKSSWLMLVAHEEGSRYIPQRGDEIVYLRQGHEEYISQNSLRDLGPW
KTIKGKIRAVEFCLIQNLEFKTRPGSGESCAKMTLKFVDPASDVEGKSFQLTLPEVTGFP
DFLVERTRYDAAIERNWTSRDKCQVWWKNEGEEDGSWWEGRILNVQAKSHEFPDSPWERY
IVRYKSDPSETHQHSPWELYDADTQWEQPRIDDETREKLMSAFTKLEQSGNKAQDYYGVE
KLRQVSHKSNFINRFPVPLSLETIRARLVNNYYRSLEGMKHDIEVMLSNAESYCGRNVEL
TTRVRRLSEWFRRTLSSL
NT seq 5097 nt   +upstreamnt  +downstreamnt
atgtcttttcggaagtatattctcccttgtgatgcaccatctggaagtatgaaatcattg
aacatatctggaaaggctaatcaaaattctcagccatctgatccacaaaggtcaacagag
gctgatgtggacatcgacatgggtgaggtctattttttgattatgcatttcctatcagct
gggcaatgtcacagaacttatgggcaattctggaatgagcttctggagcatcaactttta
ccccgtagataccatgcttggtattcaaggagtggagcaccaagtggtgatgaaaatgat
gatgggaggtctttcccattaagttacaatagattggtggaaaggtactctcacgtggga
aaggatcacttggtgaagctcttaaaacaattattgttgagtgtgaaagccccccctctg
ggtatggttggtggcaatacaattaatgcagcagctgttccaactctgctaggaactggt
tccttttcacttctcagcagtgatcaagatcagaggaatgatgaagttaagcctccaggt
cacttacgttggccgcacatgctagcagatcagctgcgtggactaagtttgagagaaatt
ggtggtggattttctaaacaccatcgtgcaccatctatccgtgcggcgtgttatgcgatt
gcaaaaccatccactatggtgcagaagatgcaaaatattaaaaaagttcgaggacatagg
aacgcagtttattgtgcaatatttgatcggtctgggagatatgttataactggctcagat
gaccgacttgtaaagatttggtcaatggaaactgcatattgcttggccagctgtcgtgga
catgaaggtgatatcactgacctagctgtcaattccaacaacactttagtagcttctgct
tcaaatgattgcatcgtcagagtttggcgtttgcctgatgggctgccgatttctgtgttg
cgtggtcatactggagctgttacggcaatagcatttagtccaagacccagttctatttat
cagctcttatcgtcatctgatgatggaacatgccggatttgggatgctagatattcccag
tttaatccacgcctatacatacccaaaccgcctgaaacagttgctgggaagaacactggt
ccatcatcaagcactgttttgcaaagccaccagatcttctgttgtgcattcaataacagt
ggaacattctttgtaactggaagctcagacacttgtgcaagagtctggaatgcttgtaaa
tctaattctgatgattcagagcagcctaatcatgagatagagattttatctggtcatgaa
aatgatgtaaactatgtgcaattcagtggttgtgctgctgcgtccagattttcctccact
gatgcatcaaaggaagactgtggccctaagttcaaaaactcatggtttaatcatgataac
atcgttacttgttcccgtgatggtagtgcaatcatatggatcccgagatcacgtagatcg
catggaaagggtggacgttggcagaaagcgtatcatttgaaagttccaccaccaccaatg
ccacctcaacctcctcgaggcggtccacgtcaaagaattcttccaactccacgtggtgtt
aatatgattgtctggagcttggataaccgttttgtccttgctgctatcatggattgcaga
atatgcgtgtggaatgctgttgatggtagcttagtgcattctttgacgggtcatactgaa
tctacctatgtacttgatgtccatccttctaatcctagaatagccatgagtgctggttat
gatgggaaaacaattgtctgggatatatgggaaggtgcacctattcgaacatacgaaatt
gggcgattcaagctagttgatggaaaattttctccggatgggacatcaataatactttca
gatgatgttggccaattgtacatattgaatacagggcaaggagaatcccagcaggatgcc
aagtatgaccagttttttcttggagattatcgccctgtcgttcaggatacaaatggaaat
gtccttgaccaggaaacacaacttgctccgtacaggaggaatatgcaagatctcctttgt
gatgcaggcatgattccatatccagagccataccagagcatgtatcaacgaaggcggtta
ggagctttgggaatcgagtggagaccctcgtcattccgattttctattggaacagacttc
aacatggaccagccgtaccaaacttttcccatcatagacttggaaatgctgattgaacca
cttccaggatttgtggatgcaatggattgggaaccagaaattgagatacaaagtgatgaa
tcagattcagagtatcatgtaactgaggagtattcttctggaaaagagcacgggagtttc
tgttctgatgcttctgcaaatccagaaaatagtgacgaagacagtgaggctgaagacaat
caaaaagatgcgcttcgtagatcaagaaggaagaaacagaaagaagctgaagttatgaca
tcctctggaaggcgtgtaaaaaggaagaacttggacgagtgtgacaacagttctcatagg
atcaatcactctaggaaatcaagacatggtcgaaaagcgaagaaaaagtcttcatcaaaa
tctttgagaccccagagagctgctgctcgcaatgcccttcatttgttttccagaattaca
gggacatctactgaaggagaagatgaatatggttcagaaagcgattcatctgatagtgag
tccacacttcaggactcgaacaatggaaatgaagattcggatatgtccttaagtagtgaa
cgacatggacattcgaaggggaaagagatatgcgttgatcactctgatgaaacaaataag
ctccagccatttcccaattctaatctcaatggtggaattaggaggagattggtcctaaaa
ctgccaaatcgtgattcaagtaaatatggccctccaatgaattacaagcctggtctagct
ggtccatctttggctcctgaggaaggtgctgaaataagtcaaaactactttggctgtgag
gattacaacctgagtgatgctaatggtgacataagagaaaagagtgaaattgatcaaccc
acaaaaattgaaaatcacttggacctcttggaagggtgcaaagatggaaacatcaaatgg
ggaggggtcaaatcccgctcaaccaagcgctctaggatgggagaattgtttccatcaggc
tctgagacaggacctagctcatttgctgatggaaacattctgaaagaaaatgttgttaat
gggcacccaatgcttgaaaaggagaaccacagcgttcctccttgttcagggatccaaaat
gaaaccaatggaattattcatgtcaatgagaatcattgtcaggattctatgcaggagaca
gaaaatgttaagcttttagatggtactgacagtgatcatccatgtaaacaaaatgcaact
cctgtcccaatgaggttgcgtattaggtcaaagactctttttggtcatcctgataactgt
gacatgattgatgcaaaaacttcattggaggattctgggtgcactgcttgtgatacagtt
tctgaatgtcaggacactgagaaggtcttaagttcagaagcccccactgaagaagatagc
agaacaccaactttagatgatggagaccgtgagaagaagttagatgcagataatattggt
ggatcttctgggacagaattgcaagttccacagccggtgcggtcacatgatatgttcact
gctgtctatagaaggtcaaaatttggtcggagtagaagtggtagagaaagtgtcagtgga
agtatggaagcgaccacttcaaacgtggggagccatagactagctgagggatctgaggcc
tttatcgagggagttcgaagaactaggtctattagattaaggccaacaacttgtgatgtg
aatcctgcacataacaatgacagatttgtgcagtcgcatgacggttccgaggggacctca
gtggaaaagacagcaggtaacaacgatgatgaaagttcgtttgaagagaagctacttggt
tcagctagttctgttgggttgcgttctacccgaacacggagagccagctattctgcccgt
gaacctagtcctccagacagaaagaaatcataccaagcagcaaaaagctcatggttgatg
ttggtagcccatgaggagggctcccggtatatacctcagcgaggggatgaaattgtatac
ttaagacagggccatgaagagtacataagtcagaatagtttgagggatttaggcccctgg
aaaacaataaagggaaaaataagagcagtagaattttgtttgattcaaaacctcgagttc
aaaacacggccaggttctggagaaagctgtgctaaaatgacgctgaaatttgtagatcct
gcttctgatgtggaggggaaatcatttcagttgacactgcctgaagtgactggtttccct
gattttcttgttgaaagaaccagatatgatgctgctatagaaaggaactggacttctcgg
gacaaatgccaagtttggtggaagaatgaaggtgaggaagatgggagttggtgggaaggt
aggattctaaacgtgcaagctaaatctcatgaatttcctgacagcccctgggaaaggtat
attgtccgatacaagagtgatccatcggaaactcatcagcatagtccttgggaactatat
gatgctgacacacaatgggaacaaccccgtatagatgatgaaaccagagagaagctgatg
agtgcgtttactaagctggagcaatccgggaataaagctcaggactattatggggttgaa
aaattgagacaggtttcacacaagtcaaacttcattaacaggtttcctgttcccctgtca
cttgaaactattcgggctaggctagtgaacaattactataggagtctggagggaatgaaa
catgacattgaggtgatgctctcaaatgccgagtcatattgtggaagaaatgtggagtta
acaacgagagtgagacgtttgtctgagtggttcagacggacactctcatctttgtag

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