Solanum tuberosum (potato): 102601512
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Entry
102601512 CDS
T02981
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102601512
Spliceosome [BR:
sot03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102601512
Other components
Complex C specific factors
102601512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
Motif
Other DBs
NCBI-GeneID:
102601512
NCBI-ProteinID:
XP_006352537
UniProt:
M1B589
LinkDB
All DBs
Position
Un
AA seq
868 aa
AA seq
DB search
MDDYQEMERFGMENDFEDGQWIGGEFYYRKRKEKKQVQTKDDTLYGVFASGDSDSDYEGS
SSKKRKKGFSSKPDLTKPVNFVSTGIVMPNKEIDQNSKEENEEQLMPEEENKGLGLGFGA
ASVGGLGFGTSSSSNNNNNNNADEVKADGGNFLPTAFGRKIKEGALRREKEREKEKSMLA
KKSSPSESGRREPGGDVGGFEKFTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKLRPK
KMGMGFNDYKETSSAPALQESDGKQTVARPAILHVEGRSKEKLWSKQAKKVKKVYVTAEE
LLAKKQEQGLETVQKVFDMRGPQVRVLTNLENLNAEEKARENDVPMPELQHNIRLIVDLA
ELDIQKIDSDLRNEMETVVALQKEKEKLQAEAARQKRQFDNMEEIVGVLDRIGEESTSGT
LTLDSLAKAFADLQQQYVEEYTLCNLSSIACSYALPLFIRIFQGWDPLQTPTHGLEVVSL
WKDLLQGNDIFAISDAASPYTQLFMEVVFPAVRISGTNTWQARDPEPMLRFLDSWEKLLP
SSVLQSILENIILPKLSAAVNSWDPRRETVPIHSWVHPWLPLLGQRLESCYHTIRSRLES
VLHAWHPSDMSAYYILSPWKTVFDAINWEKLMVRFIVPKLLAVMHEFQINPANQNLDQFY
WVRTWATAIPIHHMLPILDIFFNKWQEVLYHWLCSNPNFEEVTKWYLGWKELIPPELQAN
EHIRYRLNLALDMMNQAVEGLEVVQPGLRENISYLRVLEQRQFETQKKAAVQAQSRPSVG
SNSGIQMDGGVDMSMKEVIEVHAQENGLLFKPKPGRMQDGHQIYGFGNISIIIDSLNQKV
FAQVEDRWSFVSLEQLLDLHNRSGSKRR
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggagatggagaggtttggtatggagaacgattttgaagatggacag
tggatcggtggtgaattctactatcggaaacgtaaagagaaaaagcaagttcaaaccaaa
gatgatacgctctatggtgtttttgcttctggcgatagtgattctgactacgaaggatca
tcctctaagaagcgaaaaaaaggtttttcatcgaaacctgacctaaccaaacctgttaat
tttgtatcaactggaattgttatgcctaacaaagaaattgatcagaattccaaagaggag
aatgaggagcagctaatgccagaagaagagaataaaggtttaggattgggatttggggca
gcatctgttggcggccttggatttggtactagtagtagttcgaataataataataataat
aatgctgatgaggttaaagctgatgggggaaactttctgcccactgcttttggtaggaag
atcaaagaaggtgcactaagacgtgagaaggaaagggaaaaggagaaatctatgttggcg
aagaaatcttcgccgtctgaatcagggagaagggaacctggtggtgatgttggtggcttt
gagaagtttaccaaagggatagggatgaagttgcttgagaagatgggttataagggaggt
ggattgggtaaaaatgagcaaggaattgtggctccgattgaggcaaagctgagacctaag
aagatgggaatgggatttaatgactacaaggagactagtagtgcaccagctcttcaagaa
tcagatggaaagcagactgttgctcgtcctgctatactacatgtggaaggtcgatcaaaa
gagaagctttggtcaaagcaagctaaaaaagtgaagaaggtttatgttacagctgaagag
ttgttggccaaaaagcaggagcaaggcctggaaactgttcagaaggtgtttgatatgaga
ggtccacaggttcgagtcttgacgaatctggagaacttgaacgccgaagaaaaagcaagg
gagaatgatgttccaatgcccgaacttcagcataatatcaggttgattgtggacttggca
gaacttgacatacaaaagattgatagtgatttgagaaatgagatggagacagttgttgct
ttgcaaaaggagaaggagaagcttcaagctgaggcagctcgtcaaaaaaggcagtttgat
aatatggaagagattgtaggtgtattggaccggataggggaagagagcacatctggtacc
ctgaccctagactcccttgcaaaagcatttgcagacttacagcagcagtatgttgaggaa
tacacactctgcaacttgtcaagcatagcgtgctcatacgctctgccattgttcattcga
atttttcagggatgggatccacttcaaactccaacacatggattggaggtggtttcactg
tggaaggatcttttgcaaggtaatgacatttttgctatctctgatgctgcatctccttat
actcaactatttatggaagttgtgttccctgctgttagaatatctggcaccaatacctgg
caggctagggaccctgaaccaatgcttcgttttttggattcttgggagaagctattgcct
tcttcagttcttcagtcaatactggaaaacattattttgcccaagttatcagctgctgta
aactcctgggatccacgtcgcgaaacagttccaatacattcctgggttcatccatggttg
cccttattgggtcaaagattggaaagttgctaccacactatacgtagcagattggaaagc
gtactgcatgcttggcacccaagtgatatgtctgcatactacatactgtctccttggaag
actgtttttgatgcaattaactgggaaaaactaatggtccgatttattgttccaaagttg
ttagcagtgatgcatgaattccaaataaatccagcaaatcagaaccttgatcagttctat
tgggtccgtacttgggctactgctattcccatccatcacatgcttccaatactggatata
ttcttcaacaagtggcaagaagttttgtaccactggttatgctcaaacccgaactttgaa
gaagtcacgaaatggtatttgggttggaaggaacttattccaccagagcttcaggcaaat
gaacacattcgctatcgactaaatcttgctctagacatgatgaaccaggctgttgaaggc
ttggaggtcgttcagcctggtttgagggagaacataagttatcttagggttcttgaacaa
aggcaatttgagactcagaaaaaagcagcagtacaagctcaatcccgtccttctgtgggc
tcgaacagtggtatccaaatggatggtggggttgacatgagcatgaaagaagttattgaa
gttcatgctcaagagaatggtttgctgttcaagcctaagcctggcaggatgcaagatggt
catcagatatatggttttggtaacatcagtattattatagattctctcaatcagaaggta
tttgcgcaagttgaggacaggtggtcttttgtgtcacttgagcagctgttggacctgcat
aatcgatctgggtcaaagcgtcgatag
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