KEGG   Solanum tuberosum (potato): 102601616
Entry
102601616         CDS       T02981                                 
Name
(RefSeq) protein LHY
  KO
K12133  MYB-related transcription factor LHY
Organism
sot  Solanum tuberosum (potato)
Pathway
sot04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:sot00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    102601616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sot03000]
    102601616
Transcription factors [BR:sot03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters Myb, Myb-factors
    102601616
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_7 Myb_DNA-bind_6 DUF5134
Other DBs
NCBI-GeneID: 102601616
NCBI-ProteinID: XP_006352623
LinkDB
Position
Un
AA seq 763 aa
MDPYSSGEELVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEALTKGVPISQALDIEIPPPRPKRKPSNPYPRKMSVAVPSLQVGAK
DGKFSTPFSSICEERNLFDLEKEPITEKAGGNEKLGNVQETQNKKNCSQGFTLFKEGASA
ASMSSGKSLQTHVAPANACAFSESVPVTKGEVNHDIANKSFLTVESNEHQQAEILDIRQS
FQGNSSCNTFDGGKSCQSSEKLAQGEKKHPPSQPDHLGEFSRNDMQVLHNYPRHVPVHIL
DGTNGSQISPDMFNHESTSQQIGGVPGLPNLYSNPASSATSEHHSNSPQSSIHQSFSCFH
PIFTPIRDPDDYRSFLQLSSSFSSLIVSALLQNPAAHVAASFAASFWPYANMERPTDSPT
DNTASQINSAPSIAAIAAATVAAATAWWAAHGLLPLCSQFQSSFTCVPTSATSMQVDACQ
PRVDKNEGREGTHNSPHAQEPVPECSEALQEQQSGSKLPPSPSSESEESEGRKLQIGLTA
TGTEQGAAVTKINEPNTEKGGKQVDRSSCGSNTPSSSEIETDALEKDDKGKEEPQESNIN
LLVGEAAIRRCRNFISPTESWKEVSEEGRIAFQALFTREVLPQSFSPSLDLKNKGKIILE
KFKQRPDEKVQCGPQLDLNDLASSICSSHQTMEDNVLLIGNKDVEKCLPMIELGQVRLKA
RRTGFKPYKRCSLEANDSRVTSSNCQDEEKSSKRLRLEGEAST
NT seq 2292 nt   +upstreamnt  +downstreamnt
atggacccttactcctcaggggaggaacttgttgttaagacaaggaaaccttatacaatc
actaagcaacgagagcgatggacggaggaggagcacaataggttcctagaagctttgaaa
ctctatggacgcgcttggcagcgcatagaagaacatataggaactaaaactgccgtgcag
atcagaagtcatgcgcaaaagttttttacaaagttagaaaaggaggctcttacaaagggg
gtcccaataagtcaagcacttgacattgaaattcctcctccacgacctaaaaggaaacca
agtaatccttatcctcgtaagatgagtgtagcagttccctcattacaggtgggagcaaaa
gatgggaaattttcgacacctttttcttccatctgtgaggaaaggaacttatttgacctg
gagaaagaaccgattactgagaaagctggcggaaacgagaagctgggcaatgtacaagaa
acccagaacaagaaaaattgctcccaagggttcactcttttcaaagaaggtgcttctgca
gcctctatgtcttcaggaaagtccttgcaaacacatgtggcaccagcaaatgcatgtgct
tttagtgagtctgtgcctgtcaccaaaggagaggttaaccatgatatagcaaataaatct
tttctcactgttgaatccaacgaacatcaacaggcagaaatacttgatatcagacagtcc
tttcaaggtaacagctcctgtaacaccttcgacggggggaaatcttgccagtcgagtgaa
aagttggcacaaggtgagaaaaaacatccaccgagtcagccagatcatttgggggaattc
tcaagaaatgatatgcaagtgctacacaactatccaagacatgtgccagtgcatattctt
gatggaacaaatggttctcaaatatccccagatatgtttaatcatgaatctacgagtcag
cagataggtggggtcccggggctcccaaatttgtattctaaccctgcttcatccgccaca
tctgagcaccatagtaattctccacagtcatccattcatcagtcattttcttgtttccac
cccatcttcacccctattcgtgatccagatgattaccgatcgtttcttcaattatcctcc
agtttctccagccttattgtttctgctttattgcaaaacccagcagcacatgttgcagca
agttttgctgctagcttttggccttatgcaaatatggaacgtccaacggattctccaaca
gataacaccgctagccagattaactcagctcctagtattgcagcaattgctgctgccaca
gtagcagctgcaactgcatggtgggcagcccatgggctcttaccattgtgctctcaattt
caaagcagttttacctgtgttcctacatcagcaacatcaatgcaagtggatgcctgtcaa
cctagagtagacaagaatgaaggaagagagggaactcataattctccccatgctcaggaa
cccgtcccagaatgctctgaagctttgcaagaacaacaatcaggttctaaattgccacct
tctccatcatcagaatcggaggagagtgaaggtaggaagctacaaattgggttaacggcc
actggtactgagcaaggagctgcagttactaaaattaatgagccaaacacagaaaagggc
gggaagcaggtagatcgctcttcctgtggatccaacacaccttcaagtagtgaaattgag
acagatgctttggagaaggacgataagggtaaagaagagcctcaagaatctaatattaac
cttcttgttggagaggctgcgattcggcgttgtagaaatttcatcagtccaactgaatct
tggaaagaagtctctgaagagggacggatagctttccaggctcttttcaccagagaagtg
ttgcctcaaagtttttctccttcacttgatctgaaaaacaagggaaagatcattcttgaa
aagtttaagcaaaggccagacgagaaagttcaatgtggaccgcagttagaccttaatgat
ctggcatccagtatctgttccagtcaccaaacaatggaagacaatgtgttattaattggc
aacaaagatgtagaaaaatgcctaccaatgatagaacttggacaagtaaggttgaaagct
cgccgtactggatttaaaccttacaagaggtgctcattggaggcaaatgatagcagggtg
acaagttcaaactgtcaggatgaagaaaaaagctcgaaaagacttcgattggaaggagaa
gcttctacttag

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