Solanum tuberosum (potato): 102601619
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Entry
102601619 CDS
T02981
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sot03036
]
102601619
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102601619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
102601619
NCBI-ProteinID:
XP_006353248
LinkDB
All DBs
Position
Un
AA seq
1314 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVGYLFDDCSEALLKVKQAFRSTAVDLPPEESKAPYHSITLPETFELDDFE
LPDNDIFQGNYVDHHISSREQITLQDNMEGVIYSTSKFGLDERFGDGDTSGLDLDEELFL
DKVAAVGDASGSADPQASVEPMTPIKQEEHHEGMAANSESMFDGVDGDADFMDHAPCTPG
LAEEPNLSNVQEISACEDHLGLEDRHVTEYAVKANSVNLSCENNMNNGSKLLENQALTAG
SNGEQPVKGYSEDLSCENNANNGSGLLENQALTDVSNADTVHSGAAEENGYHLGNMCDKQ
LVPDGQLPPSGVAVDLVSSSDPTVASGPSSAAVHQVNAKSSVLECADAIVAASDGQTNER
SLQCMLSDMDKVDVSTPGGFPDEPSLPNGISSTNVNYDVSALSSICQPVPEDISPSNQRS
PKAVSNNIAIPGTLDAGESQDITCFETPKTADCLEQSIFNEDPGAQVHFLSRCNASAQLD
ASKSSCEHAVNNEPPSNFSGFHLPETSKEGELHASAGYSEQISKESLVKEPVPREDIQKD
TDKSTDQADNVVPEDRHMEFMSSSAASTLPAPEKILSMSGGLVDLPQSIFPEATPDYLAG
FNEADAGDKFISGKKRSYTESTLTEQSFNSAESSRMVRSKKSGGFIPDDDDLLSSILVGR
RSSALKLKATPRPSEITSSKRARSAARMTASKRKVLMDDIMVLHGDMIRQQLIHAEDIRR
VRKKAPCTHAEISAIQKQLLEDEIFRAAVLTGLSVELSSLHKQTFDLSTVKVSSSSDVSC
SHAEMAVKPQITAEYAENSISNLGEQRQQPSVECAEKPISNFEEQRQQLTAEYAENPITN
LEEQQATVFNESHVERESGKEGSDERFVARDDSILGDVEATIPTENKEVDEHDQCLNSDA
SQLRPDTVTDVAAANGFHLEPSDNTAEIGPQVTYLSGADAADTASAAKELLACSKSGGLG
GDGDIIAGLPLTDLFNESGREAAFILPEVSYGSPNRAPAAQADKSRENLNDENLVVSSDW
PESNYFISEAETGIENMVEDADLLEAAQDSATVEIATNVEDIVADDFNQSFADNVIGTEQ
PTTDASYDETNMHLLDDPIGAGDYPCKQEDFSYNMMGADLTDGNLGDLNDLDYSAAGNDT
GFLNFDDDDDEEAEAADDYVPAADVPRITENIGWSSRTRAVSKYLQTLFIKESERGRTSL
SMESLLVGKTRKEASRMFFETLVLKTRDYLHVEQVIPFDDVTIRPGMKLMKSDF
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgttttactcacagttcatattggccaaaaaggggcctttgggaactatatggattgca
gcacatctggagaggaaacttcggaagaatcaagttgctgatactgatattggcgtctct
gtagactccatcctttttcctgatgtaccaattgcattgcggttatctagccatcttctg
cttggagttgtgaggatatattctcgaaaggtgggttacctatttgatgattgcagcgag
gctttgctaaaagtcaagcaagcttttcgctccactgctgtggatttaccacctgaagaa
tctaaggctccatatcactcaatcaccttgccagagacttttgaacttgacgattttgaa
ttgccagacaatgacatttttcagggtaactatgtggaccatcatattagttcaagggag
cagatcacactacaagataacatggagggtgtgatttactcaacttcgaagtttggattg
gatgagagatttggggatggtgacacttctggtttagaccttgatgaggaattatttttg
gacaaggttgctgctgttggagatgctagtgggagtgctgatcctcaagcatctgttgaa
ccaatgacaccaatcaaacaagaagaacaccatgaagggatggctgcaaattccgagagc
atgtttgatggagttgatggagatgctgatttcatggatcatgctccatgtactcctggg
ttggcggaagaaccaaatttgtctaacgttcaggaaatatcagcatgtgaggaccatcta
gggctggaagatcgtcatgtgacggaatatgctgtaaaagcaaattcagtgaatctctct
tgtgaaaataacatgaataacggaagtaagcttcttgaaaatcaggcattaactgctggc
tcgaatggtgaacagcctgtaaaaggatattcagaggatctctcttgtgaaaataacgca
aataatgggagtggacttctagaaaatcaggcattaactgatgtctcgaatgctgatact
gttcactctggggctgctgaggagaatggttaccatttaggtaacatgtgtgacaaacaa
ctggtgccagatggtcagctgcctccaagtggagttgcagtggatcttgtgtcatcaagt
gatcccactgtagcatctggaccatcctctgctgctgttcatcaggttaatgcaaaatca
tctgtactagaatgtgcggatgcgattgttgctgcatctgatggtcaaacaaatgagagg
agcttgcagtgtatgctttctgacatggacaaggttgacgtatctacccctggtggcttc
cccgacgagccttcacttccaaatggaattagttccacaaatgttaactatgatgtttct
gctttaagtagcatctgccagccagttcctgaagatatttcaccgagtaatcagagatca
cctaaggcagtctcaaataacattgcaattccaggaaccttggatgctggtgaatctcaa
gatataacttgctttgaaacaccgaagactgctgattgtctggaacaaagtatttttaat
gaagaccctggtgcccaggttcattttctgagtcgatgtaatgcttctgctcagcttgat
gcatcgaagtctagttgtgagcatgctgttaataacgagccaccatctaatttttctggt
ttccacctgccagaaacttctaaggagggcgaattacatgcttcagcaggttattcagaa
caaatctcaaaagaaagtctcgtcaaagaacctgttccacgtgaagacattcagaaagat
actgacaaatcaactgatcaagcagataatgttgttccagaagatcgccacatggagttt
atgagcagttcagctgcctctaccttgccagctcctgaaaagattctatcaatgtcagga
gggcttgttgatttacctcagagtattttcccggaggctacaccagattacttggcgggg
ttcaatgaggctgatgctggtgacaaattcatttcaggaaagaagcgcagttacactgag
agcacactaacagagcagagtttcaactcagctgaatcttcaaggatggtccgttccaaa
aagtctggaggatttattcccgatgatgatgatttgctttcttctatactagttggaaga
agatcttcagcgctaaagctaaaggctactcctcgaccttctgagattacatcaagcaag
cgtgctcgatctgctgctcggatgactgccagtaaaaggaaggttcttatggatgatatc
atggttttgcacggagatatgataagacaacagttgatacatgctgaggacatacgtcgc
gtaaggaagaaagctccttgcacacatgctgaaatctcagcgatccagaaacagttgttg
gaagatgaaattttcagagcagcagtattaactggtttgtcggtggaattgtcttcttta
cataagcaaacatttgacttgagtacagtcaaggtttcttcttctagtgatgttagctgt
tctcatgctgagatggcggtcaaaccccagataactgctgagtatgctgaaaattccatc
tcaaatttgggggaacaacgtcaacagccaagtgttgagtgtgctgaaaaacccatctca
aattttgaggaacaacgtcaacagctaactgctgagtatgctgaaaaccccatcacaaat
ttggaggaacaacaagcgacggtgttcaatgaatcacatgttgaaagagaaagtggaaag
gaaggaagcgatgaacggtttgtagctagagatgatagcatattaggagatgttgaggcc
actattccaactgagaacaaggaagttgatgagcatgaccagtgtttaaatagtgacgcc
tctcaattgcggccagatactgtcactgatgtagcagcggccaatggctttcatcttgaa
ccttcagataatacagcagaaataggacctcaggtaacttacctttctggtgctgatgca
gcagatactgcctctgccgccaaagaattattggcatgttctaaaagtggtggattaggt
ggcgatggtgatatcatagcaggtctacctctgacagatctatttaatgagtctggaagg
gaagctgcttttattttacccgaagtatcatatggatctcccaatcgtgcaccggctgct
caagctgataagtctcgggaaaacttgaacgatgaaaaccttgtagttagtagtgactgg
ccagaaagtaactactttatttctgaagctgaaactggaattgaaaatatggtagaagat
gcagatctattggaggctgcccaagacagtgctacagttgaaattgcaactaatgtagaa
gatatagtagctgatgatttcaaccagagctttgctgataacgttataggcactgaacaa
cctaccacagatgcttcatatgatgaaacaaatatgcatttgctggatgatcccatagga
gccggagactatccatgtaaacaagaagatttctcttacaatatgatgggcgcagatctc
acggatggcaatctgggggacctaaatgatctagattattcagccgctggaaatgataca
gggtttctgaacttcgatgacgatgatgatgaagaagctgaagcagctgatgattatgta
cctgctgctgatgtcccccgtatcactgagaacattggatggtcctctcgtactagggct
gtttccaagtacctccaaaccttgtttattaaagaatctgagcgggggagaacgtctctc
tccatggaaagtttattagttggtaaaacacgaaaggaggcatcaaggatgttttttgaa
actttggttcttaaaacaagagattaccttcatgtagagcaagtgataccctttgacgat
gtcacaataaggcctggaatgaagcttatgaaatcggacttttga
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