KEGG   Solanum tuberosum (potato): 102601647
Entry
102601647         CDS       T02981                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102601647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102601647
   03041 Spliceosome [BR:sot03041]
    102601647
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102601647
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102601647
Spliceosome [BR:sot03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    102601647
SSDB
Motif
Pfam: RRM_1 RRM_7 Piezo_TM1-24
Other DBs
NCBI-GeneID: 102601647
NCBI-ProteinID: XP_006339215
UniProt: M1CQE8
LinkDB
Position
Un
AA seq 412 aa
MGTKRKSSSSTSRPQPEEQKPKLQPQSSSEEEEEEEEYEEEPEESESEEKSESDLESDSD
GEDEATKRDTIRKILEPFSKDQIIQQFKTAASKNPSILSRVTSFADSDSTHRKIFVHGLG
YDATSEQLLDAFKPYGKIEECKLITDKVTGRAKGYGFVVFETRVGAKRALKEPQKIIGNR
TTSCQLAALRSAVTGQDSGGRKIYVGNVGQDVDSEKLRAFFAKFGEIEEGPSGIDSVSRK
FKGFAIFVYKSVEGANKALEEPQKSFDGCQLFCKKFVENLNNAGSSNSNQGVQQNEMSYG
FGVTPGILSGASMNGIPLLIGQNMGFGINPLLAPGFNPLFGGIGAGYGINGISPVVIASY
GSDPALQGLGTYQGAQMWQPSLGGSAAMATITTPAKDSSGAGGVTYPSSLGR
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggggactaagcgaaaatcatcatcttcaacctcaaggccccaacctgaagaacaaaaa
cctaaacttcaacctcaatcttcatctgaagaagaagaggaagaagaagagtacgaagaa
gagcccgaagaatccgaatccgaagagaaatctgaatcagatctagaatccgactccgac
ggcgaagatgaggcgaccaagcgagatactattcggaaaattcttgaaccattcagtaaa
gatcaaataatccagcaattcaaaaccgcagcttcaaagaatccatcaattctttctcgg
gtcacatcttttgctgattccgactcgacccaccggaaaatcttcgttcatggactcggg
tatgatgcaacttcagagcaattgctcgacgcctttaaaccctatggaaaaatcgaagag
tgtaagctgattactgataaggttacaggaagagctaaagggtacgggtttgtggtattc
gaaacacgggtcggggcaaaaagagctttaaaggagccccagaagataattgggaatcgt
actacttcttgtcagctggctgctttgcgatctgctgtgactggtcaagattccggtggc
cggaaaatttatgttgggaatgttgggcaggatgtggatagtgaaaagttacgggctttt
ttcgcgaaatttggtgaaattgaggaagggccatcagggattgatagtgttagtaggaag
tttaaggggtttgctatatttgtgtataagtctgttgaaggggctaataaggcgttggag
gaaccgcagaaatcgtttgatgggtgtcaattgttttgcaagaaatttgtggagaatttg
aacaatgctggtagtagtaattcaaatcaaggtgtgcagcagaatgagatgagttatggt
tttggagtgactcccgggatattgagtggcgcaagtatgaatggtataccccttttgata
gggcaaaacatgggatttggaattaacccattgcttgcacctggatttaatccgttgttt
ggagggattggtgctggttatggtataaatggcattagtccggttgtcatagctagttat
ggttcagacccagctttgcagggattagggacttatcagggtgcacaaatgtggcagcct
tctttaggagggtcagcagcaatggcaacaataactacacctgcaaaagattcatctggc
gcaggaggggtgacctatccttcgtctctgggccgctag

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