Solanum tuberosum (potato): 102601822
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Entry
102601822 CDS
T02981
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sot03009
]
102601822
03036 Chromosome and associated proteins [BR:
sot03036
]
102601822
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102601822
Ribosome biogenesis [BR:
sot03009
]
Eukaryotic type
Pre-60S particles
Helicases
102601822
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102601822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
Cas3-like_C_2
NatA_aux_su
CMS1
Motif
Other DBs
NCBI-GeneID:
102601822
NCBI-ProteinID:
XP_006348047
LinkDB
All DBs
Position
Un
AA seq
683 aa
AA seq
DB search
MPALVESETMASEDLMELKKSGNGSSADSHKKSKKTKIDSGSDSEEIKKSKKKDKKRKAL
SLDDQENGNSEVLEPDEKKKKKKKKKKDEDEAKLVEEDSEEKEEDPNALSNFRISVPLRE
ALITKGIHALFPIQAMTFDTILDGSDLIGRARTGQGKTLAFVLPILESLINGPTKVSRKT
GYGRAPSVLVLLPTRELALQVFADFEFYGGAVGLTSCCLYGNSPMGQQQVQLKRGVDIVV
GTPGRIKDHIERGNIDFRSLKFRVLDEVDEMLKIGFVDDVEFILGKVEDASQVQTLLFSA
TLPSWVKHISSKFLKPDKKTADLVGDEKMKASKSVRHIIIPCSSSARSQLIPDIIRCYSS
GGRTIIFTETRGYASELAGILPGARALHGEIQQSQREITLAGFRSGKFLTLVATNVAARG
LDIDNVQLIVQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKKSNISKIERESGVKFE
HLSAPQPADVAKAAGKEAAEAIAEISDSVIPAFKAAAEELLHTSELSPAELLAKALAKAA
GYSEIKSRSLLSSMENCVTLLLECGRPIFSPSFAYNVLRGFLSEEKVESIKGLTLTADGK
GAVFDVSADDLDTFLAGKNAQGVSLEVVKELPRLQEKDQSRGGRFGGGRGGFSDRRNGGR
FSGGRGGRGGGGGRGYGNLGRRW
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacttgttgaaagtgaaacaatggcgtctgaagatttgatggagctgaagaag
agcggaaatgggtcatccgccgactcccataagaagtcgaagaagaccaaaattgattct
gggtctgattcagaggagataaagaagagtaagaagaaagataagaagcgtaaagcttta
agcttggatgatcaggagaatggaaattcagaggttttggaaccggatgaaaagaagaag
aagaaaaagaagaagaaaaaggatgaggatgaggctaaattggtggaggaggatagtgag
gagaaagaggaggatcctaatgccttgtctaattttaggatttcagtgccactgagagaa
gctttgattaccaaagggatacatgcgctgtttcctattcaagctatgacttttgatacc
atattggatgggtctgacttgattggtcgagctcgcactggtcagggtaaaacattagcc
tttgtgttgcccatattggagtccctgataaatggacctactaaagtatcacggaaaaca
gggtatgggagggctccaagtgtcttagtgcttttacctactagggagttggcacttcag
gtgtttgctgactttgaattttatggtggggctgtggggctaacttcatgttgtttatat
ggaaattcacccatgggacaacaacaagttcaactgaaaagaggagttgatatcgtcgta
ggtactcctggaagaattaaggaccacatcgaaagaggaaatattgatttcaggtcccta
aagttccgtgttcttgatgaagttgatgaaatgttgaaaattggttttgttgatgatgtt
gaatttatattaggcaaggtagaagatgcaagccaagttcaaacacttcttttcagtgcc
actttgccgagctgggtgaagcatatatcttcgaagtttctcaaacctgataagaaaaca
gctgatcttgttggtgatgagaaaatgaaggccagcaagagtgtgaggcatattattatc
ccatgctctagttcagccagatctcagctgattcctgatatcattcgctgctacagcagt
ggtggacgcacaattattttcactgagacaaggggttatgcttcggagctagctggcata
ttgcctggggcacgtgctttgcatggagagatacaacagtcccagcgtgagattactctt
gctggattcagatcaggaaagttccttacattagtggccacaaatgtagcagcccgtgga
ttggatatcgacaacgttcagttaattgttcagtgtgagcctccacgtgatgttgaagcg
tatattcatcgatctggcaggacaggacgagcaggaaatactggtgttgctgtaatgctt
tatgatcctaagaagtccaacatctctaagattgaaagagaatctggtgtcaagttcgag
catctatctgctccacagccagctgatgttgctaaagctgctgggaaagaagcagcagaa
gcaattgctgaaatttctgatagtgtaatacctgctttcaaggctgctgcagaggaactt
ctacatacctctgaactatcaccagctgaattgcttgcgaaggcacttgccaaggcagct
ggctactctgagatcaagagtcgttcgcttctttcttccatggagaactgtgttactcta
cttcttgagtgcgggaggcccatattttcaccttcctttgcatataatgttttgcggggg
ttcctatctgaggagaaggttgaatcaatcaaaggtcttactttgacagccgatggaaag
ggcgcagtttttgatgtatctgctgatgacctggatacatttctagccgggaagaacgca
caaggtgtaagcttagaggtagtaaaagaattgccccggttacaagagaaagatcagtcg
agaggtggaagatttggtggtggtcgtggtggcttctctgacaggagaaatggaggtcga
ttttctggaggcagaggcggaagaggtggtggtggtgggagaggttatggaaacttaggc
cgtagatggtga
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