Solanum tuberosum (potato): 102601885
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Entry
102601885 CDS
T02981
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sot03016
]
102601885
Enzymes [BR:
sot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
102601885
Transfer RNA biogenesis [BR:
sot03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
102601885
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Paralog
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
102601885
NCBI-ProteinID:
XP_006341019
UniProt:
M1AH72
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All DBs
Position
Un
AA seq
793 aa
AA seq
DB search
MAVRAMNSCVIFRSAATPPLAVSRRCCCLRLLTASSRHRNRSISHSFLRCAPYPLSHVTV
RSYSVQNLVEMVMEELASIHKRGRVRATSKVELVSTGELLEDKMKKGTLQKGLLLEFKKD
SERLLLAVALKPDGKKNWMVSDQNGITTSIKPQQVTFIVPGAENFEPTEISEFVQKAHDN
LDPALLEFAWNELLEKNKSVTVQELAEMIFGSAEPLETYCAHLLLSRDEVYFAVLESKSL
SVYGPRTANQVDELLRRKLAKEVSEKEFEELIQFLRSAKQMPPQDKPPRSSWKAEEKTWH
KIESLEAFAIDSCKNDDQKKTAGMILKAMGQAKTSSAAVNLLIDIGYFPVHVNLDLLKLN
LPTDHRDEILSAAENLLSTSTDLDEADRIDLTPLKVYAIDVDEADELDDALSATRLQDGR
IKIWIHIADPTSLVQPGSIIDKDARRRGTSIFLPTATYPMFPERLAMEGMSLQQGKLCNA
VSVSVVLRSDGSIAEYSVENSIIKPTYMLTYESATELLHLNLEEEIELKILSEAAALRLR
WRQEQGAIDTATIETRIKVTNPDHPEPSIKLYVENQADAAMRLVSEMMILCGEVIATFGS
HNNIPLPYRGQPQSNIDASAFAHLPEGPVRSAAIVRTMRAAEMDFRNPIRHGVLGLPGYV
QFTSPIRRYMDLAAHYQVKAFLSGDPLPLSAGELEGIASSVNMTTRVVRRLSSSSLRYWI
LEYLRRQPKGKRYHALVLRFIKDRIAAILLTEIGIQASSWVSIGVQIGDEVDVQVEEAHP
RDDILSLKEVEAV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgcgccatgaacagctgcgtaattttccgttccgccgcaacgccgccgctc
gccgtatcccgccgatgctgctgtctccgtctattaacagcctcttctcgacatagaaac
cgttcgatttcacattcatttctccgttgtgcgccttatcctctcagccatgtcaccgtt
cgtagctattcagttcaaaacctcgtcgaaatggttatggaagagcttgcttctatacac
aaacgtggcagagttcgtgctactagcaaggtggaattagtaagcacaggagagctgctt
gaggacaagatgaagaaagggacactacaaaaaggattattgctggagttcaagaaggat
tctgaaaggttgttgctagcggttgctcttaaacctgacggaaaaaagaattggatggtt
tctgatcagaatgggattacaacctccattaagccacagcaagtgacttttattgttcct
ggtgctgaaaattttgagcccacagaaatatcagaatttgtacagaaagctcatgataac
ttggatccagcactgcttgaatttgcatggaatgagcttcttgagaagaataaatcagta
acagttcaagaactagctgagatgatttttggtagtgcggagcctcttgagacctattgc
gcccacctgctgttatcaagagatgaggtgtacttcgcagttctggagtcaaaaagtctt
tctgtatatggacctcggactgctaaccaggtggatgaacttttgcgaaggaagcttgct
aaagaggtctcagagaaggagtttgaggaacttatacagtttctgcgatctgctaaacaa
atgcctcctcaagacaaacccccaagatcttcttggaaggctgaagagaaaacttggcac
aagatagagtctcttgaagcttttgccattgattcttgcaaaaacgacgatcaaaagaaa
acagctgggatgattttgaaggccatgggacaggcaaagacttcatctgcagcagtgaat
ctcctcatagatattgggtattttcctgtacatgtaaatctcgatttgttaaagttgaac
ctccctactgatcatcgggatgagattctgtcggccgcagagaatcttttgtctacatcg
actgaccttgatgaggctgatagaatagacctgactcccctgaaggtttacgcgattgat
gttgatgaggctgatgagcttgatgacgcattgagtgcaacaaggttgcaggatggccgg
attaaaatttggatacatattgctgatcctactagtttagttcagccaggaagcataata
gacaaggatgcaagaagaagaggaacttcaatattcttgcctactgcaacatatccaatg
ttccctgaaaggttggccatggaaggcatgagtctgcagcaaggaaagctgtgtaatgct
gtttctgtgtctgttgtgttgcgttctgatggcagcattgcagaatactcggtggaaaac
tcaatcatcaaaccgacatatatgttgacatatgagagtgcaacggagctccttcatttg
aatcttgaagaagagattgaactgaaaattctttctgaagcagctgcactccggttaaga
tggcgtcaagaacagggtgctatagacacagccaccatagaaacacgaattaaggtgact
aatccagatcatccagagccgtcaatcaagctgtatgttgaaaaccaggctgatgcagct
atgaggcttgtttctgagatgatgatactctgtggggaagttatagccacttttggttct
cataacaacatccctttaccataccgaggacagcctcaatctaatatcgacgcttctgca
tttgcacaccttccagaaggacctgttaggagtgctgctattgttcgaactatgcgtgca
gctgaaatggatttcaggaatcctatacgccatggggtgttgggacttccaggctatgtt
cagtttacctcccctattcgaagatatatggatctcgcagcccattatcaggtaaaagcc
tttcttagtggtgatcctcttcctctctcagctggggagctagaaggcattgcgtcttca
gtaaacatgacaaccagagttgtaaggaggctctccagcagcagtcttcgttattggata
ttggaatacttgagaaggcagccgaaagggaaacggtatcatgccttggtccttagattc
atcaaagaccgaatagccgcaatactgttgacggagattggaattcaagcttcttcgtgg
gtgtctattggtgtacaaattggtgatgaagtagacgtgcaagttgaagaagctcatcca
cgtgatgatattctctctcttaaggaggttgaggctgtatag
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