Solanum tuberosum (potato): 102602002
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Entry
102602002 CDS
T02981
Name
(RefSeq) uncharacterized LOC102602002
KO
K23719
nuclear mRNA export protein SAC3
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102602002
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
102602002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAC3_GANP
TRAP_alpha
Motif
Other DBs
NCBI-GeneID:
102602002
NCBI-ProteinID:
XP_006341899
LinkDB
All DBs
Position
Un
AA seq
1568 aa
AA seq
DB search
MAFQGFGKNTGPIAPPKAQTPFGNSRNPSTSDTLPKWGNGQKYIYHDYDAQAHQQSPQVV
PPLPETALSASVRGSQLQDLRTTGPHTSFSSDAEILGASRTMRGSRSDLISSDQGPFVSQ
QNQSSPLFRNESPLVPKSTRSPPLAFHNNLHTEGNIPPLGGAQRPSLPPHMRGNSSQPFQ
NFPIRLPHQRLPSIPTNYGPGRQIPVKHADQVSKRTRSPPHSPPRVASFEKSALGLRESK
RPSTSPSKLRSNPPPDSLAPQSSMSGYSVNVEVDLSKPMNFPVPKRTKFPSVPSSDQVLQ
YDSNHADDDIQRETEAKAKRLARFKDDLSQQNARDDSSIPQKGPSMSQYQSIVDRPKFSA
EDSVDSTNDFSDGNLLSDYQGSESSGVIIGSCPDMCPESERAERERKGDLDQYERLDGDR
NQTSKLLAVKKYTRTAEREAVLIRPMPILQKTMDYLLNLLEQPYGESFLRLYNFLWDRMR
AIRMDLRMQHIFNREAINMLEQMIRLHILAMHELCEYTRGEGFSEGFDAHLNIEQMNKTS
VELFQLYDDHRKRGINVETEREFRGYYALLKLDKHPGYKVEPAELSLDLAKMAPDMRQTP
EVLFARDVARACRTGNFIAFFRLARRASYLQACLMHAHFSKLRTQALASLHSGLQNNQGI
PVTQVAKWLGMEDEDIEGLLEYYGFSLKEFEEPYMVKEGPFMEVDNDYPVKCSKLVHKKK
SRTIFEDVSVPHVESVSEKETETLLDKDHQQKPSAFQFLKPDSSSLSIEESMPDYETVSS
PKDEIEAIPITKTEFYQKIKYESLQAPPSHAVSSLLAPPSPSVFFPHISLEVQQQARVRS
AERPEVQLQARVGSSGKPKNDEVAQFDARSMPIQFIPARDEWESSPVLPASSLVEDTELK
HMCDEENEDEELVITSEEAETNEPAASYYDEEVAEAKLKLIIRKWKRRSLKKREMREEKQ
LASKAALSSLSLGVPMWPNRIQHSTTVEFNIDHAVSKWYQTQEKSWSRLNVSDVVATTLH
EKNAAARCLCWKVIICCEDNNINNLNPKNGMDQLNAKSWLLSKLMPAREDEDDTLITSPG
LSVWRNWLLNESGGDLICCLSVIKYTNFENLNETVAGASAVLFLLSEGIPWVLQKNQLHK
LLMSVPSGSQLPLLIVSELCKENADPSTIVKELELHEVHESRLHSFSVVYLKNQQMEQLN
GFFSDEQLRGGLKWLANESPPQPVLQCVKARELVLYHLNSLLGVLGEMNVCDVGPNNCIS
AFNEALDQSMREIAAAAHANPTCWPCPEIGLLEEHSHEHEAVTQHLPQLGWSLAPRIEPV
VRAISDCKFPSFLDDTSWLHRGSDVDVKNQILQLQSSLTKYFTEISKLMVLPLAEKEASV
MMQKFVQLQLQNSYYYIVPNWVMIFQRAFNWQLMKLVKETSFSVYILINHDLSTSMLGAV
ELEDSAQSHYHLSHPSLDEMVEAGRMPLLGCAMLDGEGRAFQPYPGMTSHSEEIPTTTGA
CKEIEHGKDAGHVEFVKASYNRMKDLNEGESEPLMTIKEMTETDKLGELLDRCKIKQNMI
DKNLSVYF
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttcagggtttcgggaagaatacaggccccattgcccctcctaaagcgcaaacc
ccttttgggaattctcgcaatccttctaccagtgacactcttcctaaatggggtaatgga
caaaaatacatctaccatgattatgatgcccaagcccaccaacagtctccccaagtagtg
ccacctttacctgaaactgccctctctgctagtgttagaggttcccaacttcaagatttg
agaacaacagggccacatacttcattttcttctgatgcagagattctgggagcctccagg
accatgaggggaagtcgttcagatttgatatccagtgatcaggggccctttgtctcccaa
caaaatcaatcatctccattgtttcggaatgagagtccattggttcccaagagtacaagg
tcacctccattggcttttcataacaatcttcacacagagggcaatattcctcctcttggt
ggagctcaacggccttcactgccccctcatatgcggggaaactcatcccagccgtttcaa
aactttccaatccgattacctcaccaaaggctgccctcgattccaacaaattatggccct
ggaagacagatcccagtgaagcatgcagatcaagtctcaaaaagaacgaggtccccccct
cattcacctcctagggtggcttcttttgagaaatcagctcttggtctacgtgaatccaaa
aggccgtctacctctccttccaaattgaggtcaaatcccccccctgactctctagctcct
caatcctcaatgtctggatatagtgtcaatgttgaagttgatctgagtaagccaatgaac
tttccagttcccaaaaggaccaagtttccttccgtaccttcatctgatcaagttcttcaa
tatgactccaatcatgcagatgatgatattcaacgagaaactgaggcgaaggcaaagcgc
ttagctcgtttcaaggatgatctaagccaacaaaatgcacgagatgattctagtattcct
cagaagggtccttcaatgagtcagtatcaatctattgtggacagaccaaaattttctgcg
gaagatagtgtagattcaactaatgatttctcagatggcaatctgctatctgattatcaa
gggtcggagtcttctggtgtcataattgggtcatgtcctgatatgtgtccagaatcagaa
agagcagaacgagaaaggaaaggagatcttgaccaatatgaacgtttggatggagacaga
aaccaaaccagtaaattgcttgctgtcaaaaagtacaccaggacagctgagagggaagct
gtgctcatacgtccaatgccaatcttacagaagaccatggattatcttttgaatttgcta
gagcagccttacggagaaagctttcttcgcctgtataacttcttatgggacaggatgcga
gcaatccgtatggatttgaggatgcaacatattttcaaccgtgaagctattaatatgctg
gagcaaatgataaggctccatatactcgccatgcatgaattgtgtgaatacacgagagga
gaggggttctctgagggatttgatgcacatctcaatattgagcagatgaataaaacatca
gttgaactatttcaattgtatgacgaccaccggaagagaggaataaatgtggaaactgag
agagaatttagaggttattatgcacttttaaagcttgataaacatccaggctataaagtt
gaacctgcagagctttcacttgatttagcaaagatggcaccagatatgcggcaaacccca
gaagttctctttgcccgtgatgtggcaagggcctgcaggaccggtaattttattgctttc
tttcggcttgcaagaagggctagctatcttcaagcttgcttaatgcatgctcatttctcg
aagttacgaacccaggccctggcttctttacactctggactgcagaataaccaaggaatc
cctgttacccaagttgccaaatggcttgggatggaggatgaggatatagaaggccttctt
gagtactatggtttttcattaaaggagtttgaagaaccatatatggtgaaggaaggccca
tttatggaagtagacaatgactatcctgtcaagtgctcaaaacttgtccataagaaaaaa
tcaaggacaatattcgaggatgtttcggttccgcatgttgagtcagtgtcggagaaagaa
acagagaccctgttagataaggatcatcagcaaaaaccttcagcttttcaatttctcaag
cctgatagttcttcactgtccatcgaggagagcatgcctgattatgaaactgtttcatct
ccaaaagatgagatagaggcgattccaattactaaaacagaattttatcagaagataaaa
tatgaaagtctgcaggctcctcctagtcatgcggtgtcaagtctactggctcctcctagt
ccttcggtattctttcctcatatttcccttgaggttcagcaacaagctagagttcggagt
gcagaaagacctgaagtacagctgcaagcaagagttgggagttcagggaaacctaaaaac
gatgaagttgcacaatttgatgcaagaagtatgcccattcagtttattcctgccagagat
gagtgggagagttctccagttttgccagctagttctcttgtagaagacacagaattgaag
cacatgtgtgatgaagagaatgaagatgaagaactggtgatcaccagcgaggaagctgaa
actaatgaaccagcagcaagttattatgatgaagaagttgctgaggcaaaacttaaactg
attatcaggaaatggaagcgacgttctttaaagaaaagggagatgcgagaggagaaacag
ttagcatctaaagctgctctgagttcgctctctcttggagttccaatgtggcccaacaga
attcaacatagcacaacagtcgagttcaacattgatcatgctgtctcaaaatggtaccaa
actcaggaaaaatcatggtcaaggctgaatgtttcagatgtagttgccaccacactccat
gaaaaaaatgcagctgccagatgcctttgctggaaagtaataatatgttgtgaggataat
aatataaacaatctgaacccaaaaaatggcatggaccagttgaatgccaagtcctggttg
ctttccaaactcatgcctgcaagagaagatgaagatgatacactaataacgtctccaggc
ctgtctgtttggaggaattggcttcttaacgaatcaggcggagaccttatttgttgttta
tcagttatcaagtacactaattttgagaatctgaatgagactgtagcaggtgcaagtgca
gttctcttcctgttgtcagaaggtatcccatgggttcttcagaaaaatcagcttcataaa
ctgttaatgtctgtaccttctggttctcagttaccccttttgatcgtaagtgagctgtgc
aaggaaaatgcagatccttccactatagttaaagaactggagctacatgaagtccatgaa
tcaagacttcattcctttagtgttgtttacctaaaaaaccagcagatggaacagttgaat
gggtttttcagcgatgaacaattaagaggaggactgaagtggctggcaaatgaatcacca
ccacaaccagttctccagtgtgtaaaagcccgagaactggttctctaccatttgaattct
ttgcttggggttcttggtgaaatgaatgtttgtgatgtgggtccaaacaattgtatctca
gcctttaacgaggccttggatcagtctatgagggaaatagctgctgcagctcatgctaat
cctacctgttggccctgtccggaaataggtttgctggaggaacatagccatgagcatgaa
gctgtgacccaacacttgccacagctgggatggagcttagctccaagaattgaaccagtt
gtgcgtgcaatatctgactgcaaatttccatcttttctagatgatacatcttggttacat
agaggttctgatgtggatgttaaaaaccagatattacaacttcaaagttctctaacaaag
tacttcacagagattagcaagttgatggtactgccacttgcagaaaaagaggctagtgtt
atgatgcagaagtttgtgcagcttcaactccagaactcatactactacattgtaccaaac
tgggttatgattttccaacgggcattcaattggcagttgatgaagttagttaaggagaca
tctttctcagtgtatatcctgataaatcatgatttgtccacttcaatgcttggagctgtg
gaacttgaagactctgcacagtcgcattaccatttgtcacatccatctcttgatgaaatg
gttgaagctggacggatgcctcttctcggatgtgctatgcttgacggggaaggaagagct
ttccaaccttatccaggtatgacttcacacagtgaagaaattcccacaacaactggcgca
tgcaaagaaatagagcatgggaaggatgctggacatgttgaatttgtaaaagccagttat
aatagaatgaaagatctaaatgaaggtgaaagtgaacctctgatgaccattaaggaaatg
acagaaactgacaaacttggcgaattactggacagatgtaagattaagcagaacatgata
gataaaaacttgtcagtatatttttaa
DBGET
integrated database retrieval system
