Solanum tuberosum (potato): 102602007
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Entry
102602007 CDS
T02981
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102602007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102602007
Enzymes [BR:
sot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102602007
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
102602007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-RING_4
DUF7567
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
102602007
NCBI-ProteinID:
XP_006362138
UniProt:
M1BMM6
LinkDB
All DBs
Position
Un
AA seq
321 aa
AA seq
DB search
MESDSIECISSLDGIDVNEIVHSQLFSSSKTPHNNNNNNNNKNNNSVRPATSVHELLECP
VCTNSMYPPIHQCHNGHTICSTCKERVHNRCPTCRQELGDIRCLALEKVAESLELPCKYG
SLGCPVIFPYYSKLKHEAMCNFRPYNCPYAGSECSIVGDIPYLVAHLRDDHKVDMHSGCT
FNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGVAPVYMAFLRFMGDETDARN
YSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVT
GKIWKEQQNPDGGACIPNLCS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagatagcattgaatgcatatcatctttagatggtatagatgtgaatgagatt
gtacattctcagttgttttcttcttcaaagacaccccacaataacaataacaataacaat
aacaaaaataataacagtgtccgtccagcaacgagtgtccatgagcttcttgaatgccct
gtttgtactaattccatgtatcctcctatccatcagtgtcacaatgggcacaccatctgc
tcaacatgtaaagaaagggtgcacaatcgatgtccgacgtgtagacaggagcttggtgat
attagatgcttagcactggaaaaggtggctgaatcacttgagctcccttgcaaatatggc
tctcttggatgtcctgtgatatttccttattacagtaagctgaaacatgaggcaatgtgt
aattttagaccttataactgcccgtatgctggttcagagtgctcaattgttggtgatatt
ccttacttggttgctcatttgagggatgatcacaaggtagacatgcattcaggttgcact
tttaaccatcggtatgtaaaatcaaatcctcgagaagtggaaaatgcgacgtggatgtta
acggtttttaattgtttcggtcagtacttctgtctccattttgaagcctttcagcttggc
gtggctcctgtatacatggcatttcttcggtttatgggagatgagacagatgctcgaaac
tacagctacagccttgaagttggaggcaatggaaggaaacttatctgggagggtaccccc
cggagcataagagatagtcatcggaaagttagggatagccatgacgggcttattatacaa
cgtaacatggcacttttcttctctggaggcgacagaaaagagcttaagctacgtgttact
ggaaaaatatggaaggaacagcagaatccagatggaggagcatgtataccaaacctatgt
agttaa
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