Solanum tuberosum (potato): 102602221
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Entry
102602221 CDS
T02981
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102602221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102602221
03036 Chromosome and associated proteins [BR:
sot03036
]
102602221
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102602221
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102602221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
102602221
NCBI-ProteinID:
XP_006341370
UniProt:
M1B498
LinkDB
All DBs
Position
Un
AA seq
1033 aa
AA seq
DB search
MEVELGTPEQLIVSQSQCKRRKISALDQILGENEADLPTLRSPDYFTDPCLSELAVRELM
ISGYCSKVENFTVGRFGYGFVKFSGETDVRGLDLDRIVKFSRHEVIVYEDENDKPPVGMG
LNKPAEVTLLLEIRSSKHYDVDSSRELVEKLRLRTERQGARFISFDPSNGEWKFFVQHFS
RFGLNDEEEDEDMIIDAVSPEVQDPVDMNGGDVSDIDEETFLANTTDLSHSLPAHLGLDP
VKMKEMRMLMFPAEEEDIDDYHGVPFDRKPQFSKESSKSPLQHKFQRVSPPLTRKTPLAL
IEYKHGSFGSDSPGSILLTQQNKGVLLKTTKTEGFKLDVRQQTPISGTYSCNVVDAGLFM
GRSFGVGWGPNGVLIHSGAPVGSKDDQCLSSIINLEKVAFDQVARDENKKFREELVDLCF
DSTLHLHKEITHETKEFGEGPFALKLQRLMCDRLMLSDVCRSYIGVIERQLEVPDLSPAS
RVLLMHQAMIWELIKVLFSTRQLSGKLKSLEDEDEEDMIPDARETSSDVDPEALPLIRRA
EFSYWLQESVCHRVQEEVSSLNDSSDLQHMFLLLTGRQLDAAVELAASRGDVRLACLLSQ
AGGSMVNRSDVARQLDIWRVNGLDFNFVETERIRVFELVAGNIHRALHDVDIDWKRFLGL
LMWYQLPPETELPIVFRTYQRLLNEGKAPSPVPVYIDEGPIEVSMNWHAVKHSDLGYYLM
LLHANQEIDFSALKTMFSAFASTNDPLDYHMIWHQRAVLEAIGAFSSNDLHVLDISFISQ
LLCLGQCHWAVYVVLHMPHREDCPYLQAALIREILFQYCETWSSQDLQRQFIEDLGIPSA
WLNEALATYFNYYSEFPKALEHFLECGKWQKAHTIFMTSVAHSLFLSEEHSEIWRLAASM
EDHKSEIEDWDLGAGIYISFYLLRSSLQEGSDTMNQDTIENKDNACADFISRLNNSLAVW
TNRLPVKARVVYSKMAEEICNLLLSDSGGSSSNEAQLSCYDTIFKAPIPEDTRAYHLQDS
VSLFTSYLSEVPS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgagttagggactcctgaacaacttattgtttctcaatctcaatgtaaaaga
agaaaaatttctgctttagatcagattttgggcgagaacgaagctgatttacctaccttg
cgatctcctgattattttactgatccatgcttgagtgaattggctgttagggagctaatg
atctcagggtattgcagtaaagttgaaaattttactgttgggaggtttggttatggattt
gtcaaattttctggggaaacagatgttagggggttggatttggatcgaattgttaagttt
agcagacatgaggtgattgtatatgaagatgaaaatgacaagcctccagttggcatgggg
cttaacaaacctgctgaagtaactttgctactggaaatacgatcctccaaacactatgac
gtggattcttctagagaactggtggagaaattaagacttagaacagagagacaaggagcg
cgttttatctcatttgatccatcaaatggagaatggaaattcttcgttcagcatttcagc
agatttggtttgaatgatgaggaagaagatgaagatatgataattgatgctgtgtctcca
gaggttcaagatcccgtagatatgaatggaggagatgtttctgacattgatgaagaaacc
ttcttagccaatacaactgatctttcacattctcttcctgcccatcttgggttagatcct
gtaaagatgaaagaaatgagaatgctgatgtttccagcagaagaagaggatatagatgat
tatcatggtgttccttttgatagaaaaccacaattcagtaaagaatcttcaaaatcccct
ttgcagcataagttccagagagttagtccacctttaactcgcaagactccattggctttg
attgaatacaaacatggtagttttggctcggactcacctgggtccattttgttgacccaa
caaaataagggtgtgcttctaaagacaacaaagactgaaggtttcaagctggatgtcagg
cagcaaacacctataagtggaacctactcttgtaatgttgttgatgcgggattgttcatg
ggtagatcatttggagttggctgggggcctaatggtgttcttattcattctggcgctcca
gttggtagtaaagacgatcaatgtttgtcctcaataatcaatttggagaaggttgcattt
gaccaagtagctagagatgaaaataaaaagtttagggaggaacttgttgatttgtgtttt
gattcaaccctccatcttcacaaggaaattactcatgaaaccaaagagttcggggaggga
ccctttgcgttaaagcttcaaagacttatgtgtgatcgtctaatgctttcagatgtatgt
cggagctatattggtgtcattgagaggcaattggaggttcctgacttatctccagcatcc
cgtgttcttctgatgcaccaagcaatgatttgggaattaataaaagtgcttttctcgaca
agacaattgagtgggaaattaaagtctcttgaagatgaggatgaggaagatatgatacct
gatgcgagagaaacttcttcagatgttgatccagaagcacttccattgataaggagagca
gaattcagctattggttgcaagagagtgtttgtcacagggtacaggaagaagtaagttct
ttgaatgattcaagtgatctacaacatatgtttttacttctaactggtcggcagctggat
gctgctgtggaactggcggcttctagaggagatgtgcggcttgcatgtcttcttagtcaa
gctggtggttcgatggttaatcgttctgatgttgctaggcagcttgatatttggagagtg
aatgggttggacttcaattttgttgagacagagaggattagggtttttgagttggttgct
ggcaacattcatagagcattgcatgatgtagacattgactggaaaaggtttctggggttg
ttgatgtggtatcagcttccaccagaaactgaattgcctattgtgttccgcacatatcag
aggcttcttaatgaaggaaaagctccatctccagttccagtttatattgatgaaggacct
atagaagtgtcaatgaattggcatgcagtgaaacattctgacctcggttactatcttatg
cttcttcatgccaatcaagaaattgatttcagtgctctaaagacgatgttcagtgccttt
gcttcaacaaatgatccccttgactaccatatgatctggcatcagcgagctgttttagaa
gccattggtgctttcagttctaatgatcttcatgtgctagacattagtttcatttctcag
ctgctatgccttggtcaatgtcattgggctgtctatgtggtgcttcacatgcctcaccgt
gaagattgtccttatttgcaagctgctcttattagggaaatactcttccagtactgtgaa
acttggagttctcaggacttgcagcggcaatttattgaggatctaggtattccatcagca
tggttgaacgaggctttggcaacatattttaattattactctgaattccccaaagcccta
gaacattttttggaatgcggaaagtggcagaaagcgcacactatttttatgacttcagtt
gctcattctctttttctatcagaagaacactcagaaatatggaggctagcagcttccatg
gaggatcacaaatcagaaattgaagattgggatctgggagctggaatatatatatctttt
tatttgttgagaagttctttgcaggagggcagtgacactatgaatcaagacactatagaa
aacaaagacaatgcttgtgcagacttcattagtcgcttaaacaactctttggctgtttgg
acaaacagattgcctgtcaaagcgagggtggtttattcgaaaatggctgaggagatatgc
aatttgctgctttctgatagcggtggaagttcatcaaatgaggcccagctaagctgctac
gataccatattcaaggcacccatacctgaagatacccgtgcataccatttgcaggattct
gtgtctctttttacatcttacctttctgaggtgccgtcatag
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integrated database retrieval system
