Solanum tuberosum (potato): 102602365
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Entry
102602365 CDS
T02981
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102602365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102602365
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102602365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
AXE1
Motif
Other DBs
NCBI-GeneID:
102602365
NCBI-ProteinID:
XP_006346780
UniProt:
M1C632
LinkDB
All DBs
Position
Un
AA seq
470 aa
AA seq
DB search
MESGKVFVGGISWDTNDDRLREYFQAFGDVVEAVIMKDRITGRARGFGFVVFADPSIAEK
VVKEKHIIDGRTVEAKKAVPRDDQHVNRTNGSIQGSPGPARTRKIFVGGLASSVTESDFK
KYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDNVLFKTFHELNGKRVEVKRAVP
KELSPGPTQSQLVGRYNHGMNRVNNFLNVYAQGYSPSLMGNYGVGTEGRYSPISVGRNGY
SLFGPVDYNMGTEIDSRLNSSYGGSGKFSSVLGYGRNLNSFHNENSNKYNVPVGHGSGRV
GNGPVLNSTGQNKWENDSLFHGTNFANTSMFVGSGSGNTGLSGVFGGLGTTWGTSPISGQ
GGRNGSFSDDNITFSGGQNGFAGGAGYGQNARSNADAESSYAPTQGVHANTFGDFYGTVS
SSILEDSTWRASSPELDSAGALSYGLGSADSLSYVGGYSVANRSTRGIAA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggcaaagtattcgttggagggatttcttgggacacaaatgatgataggctc
agagaatattttcaagcttttggtgatgtagttgaagctgtgatcatgaaagatcgaatc
actggccgtgctcgtggttttggttttgttgtctttgcagacccttccattgctgaaaaa
gttgttaaagaaaaacacattattgatggtagaactgtagaggcaaaaaaagctgttccg
agggacgatcaacatgttaatcgaaccaacggaagcatacagggttctccaggtcctgcc
cgcaccagaaagatttttgtcggaggtttggcatcctcagtcactgagagtgacttcaag
aagtattttgaccaatttgggacaatcacagatgtcgtggtgatgtatgaccataacaca
caaaggcctagaggttttggattcatcacgtatgactcagaggaagcagttgataatgta
ctattcaaaacatttcatgaacttaatggtaaaagggtcgaagtcaagcgtgctgttcca
aaagagttatcgcccgggccaacccaaagccaattagtaggtagatataaccatggcatg
aacagggtaaacaatttccttaatgtgtatgctcaaggttacagtccaagcctgatggga
aactatggagtcggaacagaaggtagatattctccaatctccgttggtcgcaatggatac
tctttgtttggtccagttgactacaatatgggaacagaaatagactccagattgaactca
agctatggtggaagtggaaagttcagttccgttcttggttatggacgtaacttaaattcc
tttcacaatgagaattcaaacaaatacaatgttcctgtcgggcatggctctggaagagtt
ggaaatggtcctgtgttgaattcaacaggtcagaacaagtgggagaatgatagtcttttt
catggtacaaattttgcaaacactagcatgtttgttggttcaggaagcgggaatacagga
ctatctggtgtttttggaggtcttggaacaacatggggtacctctccaatttctggccaa
ggtggacgtaacggttctttcagcgatgacaacatcactttcagcggtggacagaatgga
tttgcaggtggggcagggtatggacaaaatgcaagaagcaatgctgatgctgagtcatca
tatgctccaacacaaggtgttcatgcaaacacttttggggatttttatggaacggtaagc
agttcgattcttgaggactctacttggcgtgcatcctctccagagttagacagcgctgga
gctcttagttatggactcgggagtgcagactccctcagttatgtgggtggttatagtgtt
gcaaatagatcaactagaggtattgctgcctag
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