Solanum tuberosum (potato): 102602635
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Entry
102602635 CDS
T02981
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102602635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102602635
03036 Chromosome and associated proteins [BR:
sot03036
]
102602635
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102602635
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102602635
PBAF complex
102602635
GBAF(ncBAF) complex
102602635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
102602635
NCBI-ProteinID:
XP_006357192
UniProt:
M1A9J7
LinkDB
All DBs
Position
Un
AA seq
550 aa
AA seq
DB search
MSVNNNNNPNKNMGGPSSFGNSPPGNPMAHLQAQSQGQQQMPSGFPGAFQLSQLSAAHAQ
AIAQAQSKVQAHAQAQAQAQAQAQAQAAHAQFQAQLQAQGLSLSQAHALGNFGSSSPSMP
GGGLAKRLPQKPPVRPPAFTTTNTISPMRTMDLSAAARRKKQKLPEKHMHEKVAAILPES
SLYTQLLEFESRVDSALTRKKVDIQESLKNPPTIQKTLRIYVFNSFANQVRTIPKKPNAE
PPTWTLKIVGRILEEGMDPDQAAMFQKTSSMYPKFSTFFKRVTISLDQKLYPDNHIIIWD
SARSPAPQDGFEVKRKGEQEFTANLRLELNYMPEKYKLSPALTEVLGIEVETRARIVSSI
WHYVKARKLQNPDDPSYFNCDPPLQKVFGEGKVKFNTVTQKITPHLSPPQPIHLEHRIKL
IGNNPVGTACYDVLVDVPFPIQRELNALLANTEKTKEIETCDEAICSAIRKIHEHRRRRA
FFLGFSQSPVEFINALLESQSKDLKVVSGEPSRNVEKERRSQFYSQPWVEDAVIRYLNRK
PAASDAPGSG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttaacaacaataataaccctaacaagaatatgggaggaccatcctcctttggc
aattcgccgccgggtaatccgatggcacacctccaggcacaatcacaaggccagcaacag
atgccttcagggtttcctggggcatttcagttatcacagctatctgctgcacatgcccaa
gcaattgctcaagcacagtcgaaagttcaggctcatgcgcaagctcaagctcaagctcaa
gcacaagctcaagcgcaagctgctcatgcccaatttcaggcccagttacaggctcagggt
ttgtcccttagccaggctcatgctcttggcaattttggttcttcctcaccctcgatgcct
ggaggtggtttggcaaaacgcttacctcagaaacctccggtgcgtccacctgcattcaca
actactaacacaatttctccaatgagaacaatggacctttcagcggctgctcgtaggaaa
aagcagaagcttcctgagaagcacatgcacgagaaggtggcagctattttgcctgaatct
tccctttatactcagctccttgagtttgaatctcgggttgattccgctttaacaagaaag
aaagttgacatccaggagtcattgaagaatccacctactattcagaagacgcttcgaatt
tatgtattcaatagttttgctaatcaggttcgtacgattcctaagaagccaaatgctgaa
cctcctacatggactcttaagattgtaggaaggattttggaggagggaatggatcctgat
caagctgccatgtttcagaaaactagctccatgtacccaaagttttctactttcttcaaa
agagtcaccatttccttggaccagaaactatatcctgataaccatattataatttgggac
tctgcgcgatctcctgcacctcaggatggttttgaggtcaaaagaaagggcgagcaagag
ttcactgctaatttaagactagaattgaattacatgcctgagaaatacaaactttcacca
gctttaactgaagttctgggtattgaggtcgagactcgtgctagaattgtctcttctatc
tggcattatgttaaggctcgaaagttgcagaaccctgatgatccttcttacttcaactgt
gatcctccacttcagaaagtttttggggaaggaaaggttaagttcaatacagtcacacaa
aagatcacacctcatttgtctcctccacaacccatacatttggaacacaggattaaactt
attggaaataaccctgttggaactgcttgttatgatgtattggttgatgtgccattccct
atccagagggagctgaatgctctgcttgccaataccgaaaagaccaaagagattgaaact
tgtgatgaagcaatttgttctgccataaggaagatccatgagcatagaaggagaagggct
ttttttctgggttttagtcaatcccctgttgagtttattaatgcacttctagaatcccag
agcaaggatctgaaagttgttagtggggagccaagtcgcaatgttgagaaggagcgccgg
tctcagttttatagccaaccatgggttgaggatgctgttatccgctacctgaatcgcaag
ccagctgcttctgatgcccctggaagtggatga
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