Solanum tuberosum (potato): 102602669
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Entry
102602669 CDS
T02981
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102602669
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102602669
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102602669
NCBI-ProteinID:
XP_006361835
UniProt:
M1A3Q0
LinkDB
All DBs
Position
Un
AA seq
447 aa
AA seq
DB search
MGGPKIKYTFLFLCITFATIIPSLMAHIGHYDEVWRRRAEEAKEYARQIYERHPENVTLA
FNQKLRNTMKELKEVKGTNSTRRGLGTKKYCGPCIVTNPIDRCWRCDPNWADNRKRLADC
AMGFGSKVTGGKNGEFYVVTDNSDDYNDPKPGTLRYAVIQKEPLWIIFKRGMNIRLHQEM
IMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHDIVEGNGGMVRDAVDHIGIRT
KSDGDGISIFGASNIWIDHVSMQRCYDGLIDAVEGSTGITISNGHFTDHNEVMLFGASDS
SSIDQVMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIITQGN
RFIAPPDIFKKQVTKREYNPESVWMQWTWRSEGNLFMNGAYFTESGDPDWSKKHKDLYDG
ISAAPAEDVTWMTRFAGVLACKPGKPC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtcctaagataaagtatacctttctatttctatgtatcacttttgctactata
ataccgagccttatggctcatattggtcactacgacgaggtgtggaggaggagagcagaa
gaagcaaaggagtatgcccgtcaaatttacgagcgacatcctgaaaatgtcacacttgca
tttaaccaaaaacttcgcaacacgatgaaggaattaaaggaagtgaaaggtaccaatagc
acaaggagggggctagggacaaaaaagtactgtggaccttgcatagtcacaaatccaatt
gataggtgttggagatgtgaccctaattgggcagacaataggaaaagattagcagattgt
gcaatgggatttggatctaaggtcacgggtggcaaaaatggtgaattctatgtcgtcaca
gataattctgatgattataacgatccaaaacccggaactcttcgttacgctgttatccaa
aaggagccattgtggatcatatttaaaaggggtatgaacattaggttgcaccaggagatg
atcatgcagagtgacaagacgatagatgctcgtggtgttaatgttcacattactaaaggc
gctggtataaccctccagtacatcaagaatgtgatcatccacggacttcacattcatgac
attgttgagggaaatggtggaatggttcgggatgctgttgaccatattgggatacgtaca
aagagtgatggagatggtatttcaatcttcggtgcatccaatatatggattgatcatgtg
tctatgcaacgttgttatgatggtttgatcgatgctgtagaaggatcaacaggtatcact
atatcaaatggacatttcaccgatcacaatgaggttatgttgtttggtgcaagtgatagt
tcttcgattgatcaagttatgcaaatcacattagcttttaatcattttgggaagagattg
gtacaaagaatgccaagatgtcgatggggatatatacatgttgttaacaatgactatact
cattggaatatgtatgccattggtggtagcatgcatcccactatcattacacagggtaat
cgttttatcgcgcctccagacatcttcaagaagcaggtaacaaagagggagtataatcca
gaatcagtgtggatgcaatggacatggagatcagagggaaatctattcatgaatggtgca
tacttcactgaatcaggagatccagattggtccaagaaacacaaagatctttatgatgga
atatcagctgcccccgcagaagatgtcacttggatgactagatttgcaggtgtacttgcc
tgcaaaccaggaaaaccttgttag
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