Solanum tuberosum (potato): 102603003
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Entry
102603003 CDS
T02981
Name
(RefSeq) probable pectate lyase P56
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102603003
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102603003
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Herpes_BMRF2
Motif
Other DBs
NCBI-GeneID:
102603003
NCBI-ProteinID:
XP_006361836
UniProt:
M1A3P9
LinkDB
All DBs
Position
Un
AA seq
398 aa
AA seq
DB search
MEYSYRTKINVLFIVLILFVFAALGTATNAPRRKLTKKYKGPCMAVNSIDKCWRCDPFWA
EDRQKMADCALGFGINAMGGKYGPYYIVTDNSDDDVIDPKPGTLRFGVIQKGPLWITFAK
SMRIELSRELIVSSNKTIDGRGKYVHIANGAGIKIQSASNVIISNLRIHHIVPTAGGLLR
ESDDHLGLRGGDEGDAISIFNSHDIWIDHISMSRAADGLIDAVAGSTNITISNCHFTDHE
KVMLFGANDHSVEDRGMKITLVYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGS
SGATIISQGNRFIAEDKLLVKEVTYREKSTSSVEEWMKWTWISDGDDLENGATFTPSGDQ
NLLSKIDHLNLIQPEPSSKVGLLTKFSGALSCNIRRPC
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagtactcttatagaacaaaaatcaatgtactattcattgtactcattctctttgta
tttgctgcactagggacagcaacaaacgctccgaggaggaaactaacaaagaaatacaaa
ggcccatgtatggccgtgaattcaattgacaagtgctggagatgtgaccctttctgggcg
gaagatcgccagaaaatggctgattgtgcgttgggctttggtatcaatgcgatgggagga
aagtatggtccatactacattgtcacagataattctgatgatgatgttattgatcctaag
cctggaactctgcgatttggggtgatccaaaagggaccgttgtggatcacatttgccaaa
agtatgagaattgaattgagcagggaacttattgttagtagcaataaaacaatcgatgga
cgtggaaaatacgttcacatagcaaatggagctggaattaagatacaaagtgcatcaaat
gttattatctctaaccttcgaattcaccatattgtacctaccgcaggtggcctgcttagg
gagtctgacgaccaccttggcctaaggggcggagatgaaggtgatgccattagtatcttc
aattctcatgatatatggattgaccacatctctatgtctcgtgccgctgatggtcttatc
gatgctgttgctggttccactaatattacgatatccaactgtcacttcactgatcatgaa
aaagtaatgttgtttggtgctaacgatcattcggtagaggacaggggaatgaaaataaca
ttggtgtataaccactttggaaagaggttggatcaaaggatgcctagatgcaggtttgga
tttttccacctggtgaacaatgattacactcattgggaaagatacgctattggaggaagc
agtggagcaacgatcatcagccaagggaataggtttattgcggaggataaattgttggtg
aaagaggtgacatatagagagaaaagtacatcaagtgtggaagaatggatgaaatggaca
tggatatcagatggtgatgatttggaaaatggtgctacatttacaccatctggtgaccag
aatttactctctaaaattgaccatctcaatttgattcaaccagaaccctcttctaaagtt
ggattactaactaagttttctggtgctttgtcttgcaacattcgacgcccatgttaa
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