Solanum tuberosum (potato): 102603014
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Entry
102603014 CDS
T02981
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04142
Lysosome biogenesis
sot04145
Phagocytosis
sot04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
102603014
04142 Lysosome biogenesis
102603014
04148 Efferocytosis
102603014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sot04131
]
102603014
Membrane trafficking [BR:
sot04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102603014
Hops complex
102603014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
Clathrin
VPS18_RING_C
zf-RING_11
zf-RING_Vps41
zf_RING_Vps8
RPN1_RPN2_N
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-rbx1
Nup54_57_C
Beta-prop_RSE1_1st
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
102603014
NCBI-ProteinID:
XP_006343461
LinkDB
All DBs
Position
Un
AA seq
987 aa
AA seq
DB search
MERRHHVFSVDLLERYATKGRGAITCMATGNDVIVLGTNKGWVIRHDFGVGDSYDIDLSV
GRPGEQSIHKVFVDPGGSHCIATVIGSSGAETYYTHAKWTKPRILSKLKGLVVNAVAWNR
QHITEASTREIILGTDNGQLYEMAVDVKDKMEKYIKLLFELKELPEAFTGLQMETASVHN
GTRFYVMAVTPTRLYSFTGIGSLDAIFASYVDRTVHFMELPGEIPNSELHFFIQQRRAVH
FAWLSGAGIYHGDLKFGAQHSSPNGDENFVENKALLDYSKFSEGVEGVKPSSLAISEFHF
LLLIGNKVKVVNRISEQIVEELYFDQTSDAVSRGIIGLCSDASAGLFYAYDQNSIFQVSV
NDEGCDMWKVYLDLKEYAAALASCRDALQRDQVYLVQAEAAFVAKEFLRAASFYAKINYV
LSFEEISLKFISIGEQDALRTFLLRKLDNLSKDEKCQITMISTWATELYLDKINLLLLED
DGALDSNNTEYQSLIKEFRAFLSDCKDVLDEATTMKLLESYGRVDELVFFASLKEQYEIV
LHHYIQQGEAKKALQVLQKPNVATELQYKFAPDLIMLDAYETVESWMTTKSLNPRKLIPA
MMRYSSEPHAKNETHEVIKYLEYCVHRLQNEDPGVHNLLLSLYAKKEDESALLRFLECKF
GKGQPGGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD
KVEDDEDLRKKLWLMIAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL
IDDFKEAICSSLEDYNEQIEKLKQEMNDATRGADNIRNDISALAQRYTVIDRDEECGVCR
RKILNVGGDYRMTAGYMAVGPMAPFYVFPCGHAFHAQCLIAHVTRCTNQAQAEYILDLQK
QLTLLGAEPKNVSNGGLSEEPLASVTPMHKIRSQLDDAVASDCPFCGDLMIREISLPFIL
PEDAEESESWEIQPHNHPSQRSLSLAV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaagacatcacgttttctctgtagatcttcttgaaagatacgccacaaaaggc
cgtggagccattacatgcatggcgactggcaatgatgtcatcgttcttggaaccaacaaa
ggctgggtgatcagacatgactttggagtgggtgattcttatgatatagatctctctgtt
ggcaggcctggggaacaatcaattcataaggtttttgttgaccctggagggagccactgt
attgccactgttattggcagcagtggtgccgagacatattatactcatgctaaatggaca
aagccacgtattttgagcaaactaaaaggtcttgttgtcaatgctgtcgcctggaacaga
caacatataacagaagcttcaactagagaaatcattttgggtacggacaatggtcaactt
tacgagatggctgtagatgtaaaggataaaatggagaagtacattaagttactatttgaa
cttaaagaactacctgaggcattcactggtttgcagatggaaacagcaagtgtgcacaat
ggtaccagattttatgtgatggctgtaacacctactcgactttattctttcacagggatc
ggatcacttgatgcgatttttgcaagctatgtggaccgcacagttcatttcatggagctt
cctggtgaaatacctaacagtgaactgcacttctttatccagcagaggagggctgtacac
ttcgcatggctttctggagcaggtatctaccatggtgacctaaaatttggagcacaacat
agttcgccaaatggggatgaaaactttgtggaaaacaaagctcttctggactactctaaa
ttctctgaaggagttgaaggtgtcaaacctagctctctggctatatccgagtttcatttc
ctacttctcattggtaacaaggttaaggtggtgaacaggataagtgaacagatagtagaa
gaactttattttgatcagacatctgatgcagtttcaagaggtattattggcttatgtagt
gatgcctcagctgggttgttttatgcatatgaccaaaattctatcttccaggtgtccgta
aatgatgaaggttgtgatatgtggaaagtgtacttggacttaaaagaatatgctgcagct
ttggctagttgtcgtgatgcgctgcagagagaccaagtttatctggttcaggctgaagct
gcttttgttgccaaggagttcctcagagctgcatcattttatgcaaaaattaactatgta
ttatcttttgaagagatctcattgaagttcatcagcataggcgaacaggatgcactgaga
acatttctcctgcggaagcttgataatctttcaaaggatgaaaaatgtcaaataacaatg
atttcgacatgggctactgaattatatcttgataagatcaacctgctgcttctggaagat
gacggtgcattggacagtaataatacggagtaccaatcactcattaaagagtttcgtgct
ttcctaagtgactgcaaggatgtattggatgaggcaaccaccatgaaactactagaaagc
tacggtagagttgatgagctagtgttctttgctagtctaaaggagcaatacgaaattgtg
cttcaccactacattcagcaaggagaagcaaagaaggcgttacaagttcttcagaagcct
aatgttgcaacagaacttcagtacaagtttgcaccagatctcatcatgcttgatgcatat
gaaactgttgagtcatggatgaccactaagagtttgaacccgagaaagctcattcctgca
atgatgcgttattcaagtgaaccacatgcaaagaatgaaactcatgaagtaatcaagtac
ctggagtattgtgttcatcgtttacagaatgaggatcctggagttcacaatctgttactt
tccttatatgccaaaaaggaagatgagagtgctcttctgcgtttcctagaatgcaagttt
ggtaaagggcaaccaggtggacctgaattcttttatgatcccaaatatgctctacgcctt
tgcctcaaggaaaagagaatgcgagcttgtgttcatatatacagcatgatgtctatgcat
gaagaagcagttgccctagcattacaggttgatccagagcttgctatggctgaagcagac
aaggtagaagatgatgaggacttgaggaagaagctttggcttatgattgctaagcatgtc
attgagcaggaaaaaggaaccaaaagggagaatatacggaaggcaattgcttttctcaag
gaaactgatggtctgttaaagattgaggacattttacccttcttcccagactttgcttta
attgatgacttcaaggaagcaatttgttcatccttagaagattacaatgagcaaattgaa
aaactaaagcaggagatgaatgatgcaacccgtggtgcagataacataagaaatgacatc
agcgctcttgctcagcgatatactgtaattgatcgggatgaggaatgtggggtttgccgg
cgaaaaatattaaatgtgggtggtgactatcgaatgactgcaggttatatggctgttgga
ccaatggctcctttctatgtctttccatgtgggcatgcatttcatgcacaatgcctgatt
gctcatgttacaaggtgtactaatcaagctcaagctgaatacattctggatctgcagaag
caacttactttacttggggctgaacctaagaatgtgtcaaatggtggcttgtcggaagaa
ccgctagctagcgtgacacccatgcataagatccggtcacagctggatgatgctgtagct
agtgattgcccattttgtggcgaccttatgatccgagagatttccttgccgttcatcttg
ccagaagacgcagaagaatctgaatcttgggagatacagccacataatcatcctagtcag
agaagcctttctttggctgtgtga
DBGET
integrated database retrieval system
