Solanum tuberosum (potato): 102603044
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Entry
102603044 CDS
T02981
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102603044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102603044
Enzymes [BR:
sot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102603044
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
HECT type E3
102603044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
ARM_ARMC5
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
102603044
NCBI-ProteinID:
XP_006366981
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Position
Un
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AA seq
1845 aa
AA seq
DB search
METRSRKRTEATSSAPSASSPSSGPTTRAVKRARFTTRAASNSISTRSRLTNRSQDQQSM
DSTNESSGSGSRTRRGKNHGADRNNPEKGKEKEHEIRDRDRDMGLNMDTDGGDEDDNESE
GGAGILQHNLTSASSALQGLLRKLGAGLDDLLPSSAMVSASSSQQNGRLKKILSGLRADG
EEGKQIEALTQLCVMLSIGTEDSLSTFSVDSFVPVLVGLLNHMSNPDIMLLAARALTHLV
DVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQSLQALKKISLEDPTACLQAGALMAVL
SYLDFFSTGVQRVALATAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASICLT
RIAEAFASSPEKLDELCNHGLVTQAASLISTSNSGGGQASLSTETYTGLIRLLCTCASGS
PFGAKTLMMLGISGILKDILSASVSISPAMSRPAEQIFEIVNLANELLPPLPQGTISLPV
SKNLFIRGPFTRKSSASGSSKQEDLNASSQEVSAHEKLLNDQPELLQQFGMDLLPVLIQT
YGSSVNTAARHKCLSVIGKLMYFSNADMIQSLINDTNLSSFLAGVLAWKDPQVLVPALQI
AEILMEKLPGVFGKMFVREGVVHAVDALMLSGSHVSAPPHPTRAEKEKHNRRRSTNSNTD
AISVEDLTSPVPSTGSLPNSIEIPTVNSSLRMSVSTCAKAFKDKYFPSDSEAAEAGVTDD
LIRLKNLCMKLNAGIDEQIAKPKGKSKTFGPQLGDSSVGKEENLAEVIAAMMGELSKGDG
VSTFEFSGSGVVASLLKYFTFAYLSKERISDTSMSRLRQKAIRRYKSFIAVALPAGVDGG
SMVPMTVLVQKLQNALCSLERFPVVLSHSSRSSTGNARLSSGLSVLSQPFKLRLCRAQGE
KTLRDYSSNVLLIDPLASLVAIEEFLWVRVERPEAEQKASAGNSGSGTIPAGGSASSPSM
STPASASRRHSARSRSAVNINESDGSSSKGKGKAVLKPAQKDGRGIRSRDPARMRAALAK
ALGEEKPVDGETSSEDDELHPSLIELDDALVIEDDMSDEDEDDHDDVLRDDPLPVCMADE
VHDVKLGDSSEDSPFAQTPTGSNTNAAGGSRSRIASARGSDSVEFRSRNSYGSRGAMSFA
AAAMAGLSSASVRGVRGARDRHGHPLLSSGDPPKLIFSVGGKPLNRQLTIYQAIQRQLVL
DEDDDERYGGNDFVSSDGNRVWSDIYTITYQRADNQPERSSGSGSSISKSMKTNSSTSSS
ADPSLVRASLLDSILQGELPCDLEKSNPTYSILYLLRVLEALNQLAPRLRVLSMIDDFSE
GKISSLDELSTTGIKIPSEEFVNSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLF
PFETRRQYFYSTAFGLSRALYRLQQQQGADGNGSTHERAVRVGRLQRQKVRVSRNRILDS
AAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLISHDLQELGLGMWRSGLSLTSNEH
SMEVHIDNKLSRSDRDLVQAPLGLFPRPWSPHTGTVDGGQFCKAIEYFRLLGRVMAKSLQ
DGRLLDLPLSMAFYKLVLGQELDLYDILSFDSELGKTLQELQALVSRKQYIESIKDQNLD
KSYDMRFRGTPVEDLCLDFTLPGYPEYVLKAGDENVDLSNLEEYISLVVDATVKTGIRQQ
MEAFRSGFNQVFDFSALQIFSPSELDYLLCGRRELWKPETLVDHIKFDHGFTSKSPPIIH
LLEIMGEFTPEQQRAFCQFVTGAPRLPAGGLAALNPKLTIVRKHSSSAGNAAHSSNAPSE
SADEDLPSVMTCANYLKLPPYSTKEIMSKKLLYAINEGQGSFDLS
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacggagccggaaacgaacggaggccacgtcatcagcgccttctgcttcttct
ccttcatcaggtcccaccacacgcgctgttaagagagctcgttttaccacacgcgccgcc
tcaaactcgatctcaactcgttcccgactcacaaatcgttcccaagaccaacaatcgatg
gactccacgaatgaatcatccgggtcgggcagcagaaccaggcggggaaagaatcacggg
gcagatagaaataatccggagaagggtaaggagaaagagcacgaaattagggatagagac
agagatatgggattgaacatggatactgatgggggtgatgaagatgataatgaaagtgaa
ggtggtgctgggattttgcaacataatttgacttcagcaagtagtgcacttcaaggattg
ttgagaaaattgggtgctggtttggatgatttactgccgagttcagcaatggtgtccgct
tcctcgtcccaacagaatgggcgtctgaagaagatattatcgggcttgagagctgatggg
gaagaagggaagcaaatagaggcattgacgcagctttgtgtgatgctttccattgggaca
gaagactctttgagcactttttcagtggactcgtttgtacctgtcctggtggggttgctt
aatcatatgagtaatcctgatattatgcttctcgcagctagggcgttaacccatttggtt
gatgttctgccatcttcttgtgctgctgttgtgcattatggagcggtttcatgttttgta
gctcgcttactcacgattgaatacatggacttagctgaacagtctctacaagctttaaag
aagatatctctagaagatccaactgcttgtttgcaagcaggtgcactcatggctgtgcta
tcgtatctcgatttcttttccactggtgttcagagagtagcactagcaactgctgctaat
atgtgcaagaagctgccttcggatgctgctgactttgtgatggaagctgttccattgttg
acgaatctccttcagtatcatgatgcaaaggtattagagcatgcttctatctgcttgacc
cggattgctgaagcatttgcatcatctccagaaaagctagatgaactctgtaatcacgga
cttgtcacacaggctgcctccctcatctcaaccagtaattctggaggtggtcaggcttca
ctcagcacagaaacttacacaggcttgatccggcttctttgtacttgtgccagtggctct
ccattcggggctaaaaccttgatgatgcttggtatcagcgggatcctcaaggacatttta
tcagcctctgtctctatttcacctgccatgagcagacctgcggagcagatttttgagatt
gtgaatcttgcaaatgaactacttcctccgctgcctcaaggaaccatctctcttcccgtt
agcaaaaatttgttcattagaggtccttttacgaggaaatcctctgctagtggttctagc
aaacaggaggatctgaatgcatcttctcaggaggtatcagctcatgagaaactattgaat
gatcaacctgaacttctgcaacaatttggaatggatctccttcctgttctgatccagaca
tatggatccagtgtaaatacagcagcacgccacaaatgcctctcagttattggaaaactt
atgtatttcagtaatgcagatatgattcagtctttaattaatgacactaacttgtcaagt
ttcttggctggggttttggcgtggaaggatccccaagtattggtccccgctcttcaaata
gcagagattctaatggagaagctccctggagtttttggcaagatgtttgtccgggaaggt
gttgttcatgctgtagatgccttgatgttgtctgggtctcatgtttctgctcctccccat
ccaacacgtgctgagaaggagaaacataatagacgccgtagcactaattccaatacagat
gcaatttctgttgaagatcttacaagtccagttccaagtactggatctttgccaaattcg
atagaaattccgactgtcaattctagccttcggatgtcagtcagtacatgtgcaaaagct
ttcaaggataaatacttcccatcagattctgaggctgctgaagctggtgtcacagatgat
cttatacgattgaagaatctctgcatgaagttgaatgctggtattgatgagcagatagct
aaacctaagggaaaatccaaaacatttggtcctcagcttggggatagttctgttggaaaa
gaagaaaacttggctgaagtgatagctgccatgatgggggaactcagcaaaggggatggt
gtttcaacttttgagttcagtggaagtggagttgttgcttctttgctgaaatattttacg
tttgcgtacctttctaaggaaagaatctctgatactagtatgtctaggcttcgacaaaaa
gcaatcagaagatacaagtcttttattgcagttgcccttcctgctggtgttgatggtgga
agtatggttcccatgactgttctggtccaaaagcttcaaaatgctctatgttcgttggag
cgttttcctgttgtgttaagtcatagttccagatcatcgacaggaaatgcacgtctttct
tcaggtttaagtgttttgtctcagccttttaagctgcgcctttgcagagctcaaggagag
aaaaccctccgtgactactcttcaaatgttttgctgattgatcctttggcaagtttagtt
gctattgaagaattcctctgggtccgagttgagcgacctgaggctgaacagaaggcctct
gcaggaaactctgggtctgggactatacctgctggaggcagtgcgtcatctccatctatg
tccactcctgcctctgcatctcgtcgtcattctgctcgatcaaggtcagcagttaatatt
aatgaaagcgatggaagctcttcaaaaggcaaaggtaaagcggttttgaagcctgctcaa
aaagatggcagaggaattcgatcaagagatcctgctagaatgagagctgccttggcaaag
gccttaggagaggagaaacctgttgacggggagactagttcagaggatgacgagctgcat
ccttctctcattgaacttgatgatgctttggtgattgaggacgatatgtccgacgaagat
gaagacgaccatgatgatgtgctgagggatgatcctcttcctgtctgcatggcagatgaa
gtgcatgatgttaaattgggagactcttcggaggatagcccttttgcacagacaccaact
ggtagcaatacaaatgctgctggtggttctaggagcagaattgcttctgctcggggatct
gattccgttgagttcagaagtaggaattcctatggttcaagaggggcaatgtcatttgct
gctgctgccatggctggtctttcatctgctagtgttagaggtgtgaggggcgctagagat
cgacatgggcatcctctactcagctctggtgatccaccaaaactaatattttctgttggt
gggaagccgcttaataggcagttgactatctaccaagctatccagcggcagcttgttcta
gacgaggatgatgatgagagatatggtggcaatgattttgtatctagtgatggaaacagg
gtttggagtgatatttacactatcacataccagagggcagacaaccaacctgagaggtcg
agtgggtctgggagttcaatttccaagtctatgaaaaccaattcttcaacaagttccagt
gctgatccttcattggttcgagcatcattgttagatagtatattgcagggagaacttcct
tgtgatctggagaaaagtaaccctacttacagtattttgtacctcttgcgtgtattggag
gcgctgaatcagcttgccccccgtttgcgagtcctgtccatgattgatgatttctctgaa
ggaaaaatttctagtctagatgagctcagtactacgggtatcaaaattccttctgaggaa
tttgtcaatagtaagctcactccgaaattggcacgacagatccaggatgctcttgcactt
tgtagtggatctcttccatcttggtgttaccagttgaccaaggcatgcccatttcttttt
ccatttgagactcggcgccagtacttctattcaactgcttttgggttgtcacgtgcttta
tataggctgcagcaacagcaaggtgctgatggtaatgggtctactcatgagagagcagtt
agggttggcagattacagcgccagaaagttcgtgtctcaaggaaccgcattctggattct
gctgcaaaagtaatggagatgtactctagccaaaaagctgttcttgaagttgaatatttt
ggtgaagttggtactggcctgggtcctacactggagttttatacccttataagtcacgat
ctacaggaacttggacttggaatgtggagatctggtttatcattaacttcaaatgagcat
tctatggaagttcatatagataataaattaagtaggagtgatagagatcttgtccaagca
cctcttggattattcccacgtccctggtcaccacatactggtactgttgatggaggtcaa
ttctgtaaggcaattgaatatttccgcttgcttggacgtgttatggcgaaatctcttcaa
gatggacggcttttggaccttccactgtccatggccttctataagcttgttcttggccaa
gaacttgatttgtacgatattctttcttttgattccgaattggggaagactttgcaagag
ttgcaagcccttgtcagtcgaaagcaatatatagaatcaataaaagatcagaacctggac
aaatcttatgacatgcgttttcgtgggactccagttgaggatctttgtttagatttcaca
cttcctggctatcctgaatatgttcttaaagcaggcgatgagaatgtggatctcagtaac
ttggaggagtacatttctttggtagttgatgctactgtcaaaactggaatcaggcagcaa
atggaggcttttagatctggcttcaatcaggttttcgacttttcagctctgcaaatattc
tctccttcagagttagactatctattatgtggccgtagagagctgtggaagcctgagacg
ctagtagatcacattaaattcgatcatggattcacatccaagagtcctcccattattcat
ttactagagattatgggagagttcacacctgagcagcaacgagcattctgccagtttgtc
actggtgctcctcggctccccgcaggtggtcttgctgctctgaatcctaagttgacaatt
gtgaggaagcattcatctagtgctggtaatgcagcacacagcagtaatgccccatcggaa
tctgcagatgaagacctgcccagtgtgatgacatgtgctaattacttgaaactccctccc
tattctactaaggagatcatgtccaagaagttactctatgccattaatgaaggtcaagga
tcgtttgatttgtcataa
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integrated database retrieval system
