Solanum tuberosum (potato): 102603118
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Entry
102603118 CDS
T02981
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102603118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102603118
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102603118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
102603118
NCBI-ProteinID:
XP_006341264
LinkDB
All DBs
Position
Un
AA seq
1078 aa
AA seq
DB search
MQRQKTLLSYLKKPSPEDQSSGDNTINGRKFLSKNAVPIDLKEEILGTETPPEKVPLPFN
NGHKSSVFSSIKHKFSREKPRNIAKGDPCNISSVCTKNEGSDGLGNASVSLQSGTNRSFV
SSTGNSNQEGKGLVSLIPSDDHGFGPETPSMQPYVPGLKRDQDNICSSGDRSDCFSLNAS
KRIKSLKGLNFERKNLEEEFEMTSKFEWLHPSQIKDANGRRPGDPLYDKQTLYIPPDALR
KMSASQKQYWDVKCKYIDIVLFFKVGKFYELYELDAEIGHKELDWKMTQSGVGKCRQVGI
SESGIDEAVQKLLARGYKVGRMEQLETSEQAKSRGSTSVIRRKLVHVLTPSTTSEGNIGP
DAVHLLAVKETCNELGNGSTTIGFAFVDCAALKVWVGSIDDDASCAALGALLMQVSPKEV
IFNARGLSKDAQKALKKYSSTGPAAPLLSPVQPGADFVDPAEVKNFLDLKGYFKRSCNKW
DHTFDGENHDVALCALGILVNHLERLMLDEVLHNGDVLSYEVYKGCLRMDGQTLVNLEIF
NNNANGSPSGTLYMYLDNCVTLPGKRLLRKWICHPLKDVEKINHRLDVVDKLVDNSDATL
STAQYLRKIPDLDRLLGRVKASIQSSEALLLPLIGAKILKQRVKVFGLLVKGLRIGLDLL
RLLQKECLTSSLAKVVSLPVLDGDNGLDKFLTQFEAAIDSDFPNFQDHNATDFDAETLSI
LMELFIEKATEWSQFIYAISCVDVLRSFSITAKFSSGVMCRPVILPLSKPSNFCNETGGP
TLNIKGLWHPYALGESGGLPVPNNLHLGGNTNIRYPRTLLLTGPNMGGKSTLLRATCLAV
IMAQLGCYVPGETCVLSLVDIIFTRLGATDRIMTGESTFFIECTETASVLQNATYNSLVL
LDELGRGTSTFDGYAIAYAVFRHLVEMVNCRLLFATHYHPLTKEFASHPHVTLQHMACSF
KLKSQSSSPTEQELVFLYRLTSGACPESYGMQVALMAGIPKTVVESASSAGQVMKKMNGE
SFKSCEQRANFSTLHEQWFTTLLDISKTDGGFDNDNDSDLFDTLFCLWHELKADRSTC
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcagaaaactttactttcgtatctcaagaaaccttcgccggaggaccaaagc
tccggcgataacacaatcaatggccggaaatttctaagtaaaaatgcagttccgatagac
cttaaggaagaaatattgggaactgaaactcctcctgagaaggtgccactcccgttcaac
aatggccataagtcttctgttttctcttctattaagcacaagtttagcagagaaaaacca
cggaatattgcgaaaggtgatccatgtaacatatcctctgtttgtacaaaaaacgaagga
tcagacggattggggaatgcttctgtttccttacaatcaggcactaatagaagttttgtt
agttctactggaaatagtaatcaagagggtaaaggattagtatctcttattccaagtgat
gatcatggttttggaccagaaacaccaagtatgcaaccttatgtacctggattaaagcga
gaccaagacaacatttgttcctcgggggataggagtgattgcttttcattgaatgcaagc
aagaggattaaaagtcttaagggcttgaattttgaaaggaagaaccttgaggaggagttt
gaaatgactagcaagtttgagtggcttcatccatctcaaatcaaggatgcgaatggtaga
agaccaggggacccactctatgataagcaaacactctatattcctcctgatgcgttgaga
aaaatgtccgcttctcagaagcagtactgggatgtcaaatgtaaatacattgacattgtg
cttttctttaaagtgggaaaattttatgagctgtatgagctagatgctgaaattggtcac
aaggagcttgattggaaaatgacgcaaagtggcgtgggaaaatgtcgacaggtcggtata
tctgaaagtggaattgatgaagctgttcagaagctcctagcgcgagggtacaaagttgga
cggatggaacagttggaaacatccgagcaagcaaaatctagaggctctacttctgttatt
cgtagaaaactagttcatgtactcaccccttctacgacaagtgagggtaatattgggcct
gatgcagttcatcttcttgccgtcaaggagacttgcaatgagctggggaatggttcaacc
actattggatttgcttttgtcgattgtgctgctctgaaagtttgggttggttccatcgac
gatgatgcatcttgtgcagctttgggggctttgctgatgcaagtgtcaccgaaggaagtt
atattcaatgctaggggtttgtcaaaggatgcccagaaagctctgaaaaaatattcatca
acaggtcctgcagcaccactcctatctccagttcagccaggtgcagattttgttgatcct
gcagaagtgaaaaatttcctcgacttgaaaggttactttaaaagatcttgtaataagtgg
gatcacacctttgatggagagaaccatgatgttgctttatgtgctcttgggattcttgtt
aatcatttagagcgattgatgttagatgaggtcttacataatggtgatgttctatcatat
gaagtctataagggttgcctcagaatggatggacagacgcttgtcaatcttgaaatcttc
aacaataatgccaatgggagtccatcaggtactttatacatgtatctggataactgtgtt
acattacctgggaagcgacttttaagaaaatggatttgtcatcccctcaaagatgtagag
aaaatcaaccataggcttgatgtagttgacaaacttgttgacaattcagatgctacatta
tccactgctcaatatcttcgcaagattccagatttggataggctgcttggacgggttaag
gctagcattcaatcttctgaagcactccttctgcccttgattggtgccaagatattgaag
cagcgggtcaaagtgtttgggttgctcgttaaagggctacggattgggctggacttgcta
agattgttgcagaaggaatgtctaacctcttccctagctaaagttgtatccttgcctgtt
ctagatggtgacaatggccttgataagttcctcacccaatttgaagcagcaattgatagt
gacttccccaattttcaggaccataatgctactgattttgatgctgaaacgctatccatt
ttgatggagttatttattgagaaggctactgagtggtctcaattcatttatgccataagt
tgtgttgatgtattaagatcattttccattactgcaaaattttcttctggagttatgtgt
agaccagtgatcttgcctctttcaaagccgtcaaatttctgcaatgagactggtggacca
acactaaacatcaaaggattgtggcatccatatgctcttggcgaaagtgggggacttcct
gtccctaacaatctccatcttggagggaatacgaatatccgttatcctcgtactttacta
ttgactggaccaaatatgggtggaaagtcgactcttttacgtgccacttgtctggccgtc
ataatggctcagttgggttgctatgtgcctggagaaacatgtgtgctttcacttgtggac
atcatctttacacgtcttggagccactgatcgaatcatgactggtgaaagtaccttcttc
attgaatgcacggagaccgcatcagttcttcaaaatgctacatataattcccttgttctt
ttggatgaattgggtagaggaacaagcacttttgatggatatgctattgcatatgctgta
ttccgacaccttgttgagatggtgaactgccgcttactgtttgccacacattatcatcca
ctcactaaagagtttgcttctcatcctcatgtgacattacaacacatggcctgctctttc
aagttgaaatctcaaagttcatctccaacagagcaagaactggtgttcctttaccgccta
acctctggagcatgcccggagagctatgggatgcaagtagccctcatggctggaataccg
aaaactgtggttgaatctgcatcgagtgcagggcaagtaatgaagaaaatgaacggagaa
agttttaagtcatgtgaacaaagagctaacttttcaacactgcatgagcaatggttcacg
actcttctggatatctcgaagacggatggtggatttgacaatgacaatgacagtgacctt
tttgatacattgttttgtttgtggcatgaacttaaggctgatagatccacttgctga
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integrated database retrieval system
