Solanum tuberosum (potato): 102603163
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Entry
102603163 CDS
T02981
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102603163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102603163
03036 Chromosome and associated proteins [BR:
sot03036
]
102603163
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102603163
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
102603163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_Aladin
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR41
EIF3I
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
102603163
NCBI-ProteinID:
XP_006347640
LinkDB
All DBs
Position
Un
AA seq
354 aa
AA seq
DB search
MSIFPNSSSLKMEKKSGKKFHLRSGNSVTYDSSYPIYAMAFSSFTSSLPNRHPRIAIGSF
IEEINNCVDILSFDADNLTLKPIPNLCFEHPYPPTKLMFHPNPFDSLKSNDILASCSDYL
RLWEVGDTSIEPLFTLSKNKTSEYVAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVEIGAI
EAQIIAHDKEVYDIAWAEAGVFASASADGSVRIFDLRRKEHTTIIYESPEPGTQLLRLAW
NKHDLRYLATMSMDCNKIMILDIRSRERPVAELARHQASVNAIAWAPQSRRHICSAGDDG
QALIWELPTVVGTNGIDHMARYSAGAEINQIQWSAAHHDWIAIAFSNKLQLLKV
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttccccaattcatcctcgctaaaaatggaaaaaaaatccggtaaaaaattt
catctccgatctggaaattccgttacatatgactcatcctaccccatctacgccatggct
ttttcctccttcacttcttccctccccaatcgccaccctcgaattgccatcggtagcttt
atcgaagagatcaacaattgtgttgatattctctctttcgatgcagataacctaaccctt
aagcctattccgaatctctgtttcgaacacccttatccacctacgaagctcatgttccat
cctaatccttttgattctctcaaatcgaatgacattcttgcctcctgcagtgactacctc
cgtctttgggaagttggtgatacttctattgaaccccttttcactctcagtaagaataaa
actagtgaatacgttgcccctttgacgtcttttgattggaatgaggtggaacccagaaga
attggtacttccagtatagacactacttgtaccatctgggatgttgaaataggggctatc
gaagctcaaattatagcccatgataaagaggtttacgatatagcttgggctgaagctggg
gtttttgcctccgcttctgctgatgggtcagttaggatttttgatttgaggcgtaaggaa
catactacaattatttatgagagtccagaaccgggcactcagttgttgaggttggcttgg
aacaagcacgacttaagatatctggctactatgtcgatggattgcaacaagattatgatt
ttagatattaggtctcgagaaaggcctgtggcagagttggctaggcatcaggcgagtgtt
aatgctattgcttgggctccacagagtcgtcgacatatttgttcggctggggatgacggg
caggcgctcatttgggagttgccaactgttgtagggactaatgggattgatcatatggca
aggtactctgctggagctgagattaatcaaattcagtggtctgctgcgcatcatgattgg
attgccattgcgttttctaacaagttgcaactgcttaaagtataa
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