KEGG   Solanum tuberosum (potato): 102603749
Entry
102603749         CDS       T02981                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102603749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102603749
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102603749
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C Zn_ribbon_RanBP GTP_EFTU_D2 GTP_EFTU_D3 MMR_HSR1 GTP_EFTU_D4 Vps36-NZF-N DZR G-alpha
Other DBs
NCBI-GeneID: 102603749
NCBI-ProteinID: XP_006353808
LinkDB
Position
Un
AA seq 658 aa
MPRKVNYGVDYEEDFYDYEDYNNDYDDGYEYAEKNGRAPETNTKQELVKVGIWRCSICTF
DNRASMNVCDVCGNPKQEPVKAGVWCCPICTFDNEDTTNLCDMCGVLRNPLIKGCGGGGG
KASAATSNKVVQSNVLSSKKEIAGEVKKKLVSEEPTSSSTSTAKVRRDDMKDRGSSIETR
GNHDGMSNVSNMSVSSNPHNVESRIATSRSQSKPQKIVCTGQLEDKLNQLNLAIVGHVDS
GKSTLSGRLLHLLGQISQKEMHKYEKEAKQQGKGSFAYAWALDESAEERERGITMTVAVA
YFNTKSYRVVLLDSPGHRDFVPNMISGATQADAAILVVDASIGAFEAGIDVSGGQTREHA
QLIKSFGVDQIIIAINKMDAVGYSKERFDTIKNQLGTFLRACKFKDSSVLWIPLSAMQNQ
NLVTSPSDARLLSWFQGPCLLDAIDSLQPPQRDYSKPILMPICDLVKLPSQGQVSVCGKL
ETGALQTGDKVLVMPSREMATVRSLEHNSQVCNSAKAGDNVTVNLQGIDVNRVKAGDVLC
HPEYPIAVTNHLELKILLLDIAVPILIGSQLEFHVHHVKEAARVVRILSLLDPKTGKETK
KSPRCLLAKQNAIIEVVLQGMICVEEHSKCKGLGRVSLRASGRTIALGLVTRVLEKKE
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgcctcgtaaggtaaattatggagttgattatgaagaagacttttatgactatgaagat
tacaataatgactatgacgatggatatgaatatgcagagaaaaatggaagggcaccagaa
acaaatacaaagcaggaattggtcaaggttggcatctggcgttgttccatttgcacattt
gataacagagctagtatgaacgtgtgtgatgtatgtggaaatcccaaacaagaaccagtt
aaggctggggtgtggtgttgtcccatttgcacatttgataatgaagataccacaaattta
tgtgatatgtgtggggtcctgcgtaacccattgatcaaaggttgtggtggtggtggtggc
aaagctagcgcagctactagcaacaaagtcgtacagtcaaatgtcctatcaagtaaaaag
gaaatagctggtgaagttaaaaaaaaattggtttctgaagagcctactagttcttccaca
tcaacggcgaaggttagacgtgatgacatgaaggatagaggttcttctatagaaactaga
ggaaatcatgacggcatgagcaatgtgagcaatatgtctgtatcatcaaatcctcacaat
gtggagagtagaattgcaacttcaagatcacagagtaaacctcagaaaattgtatgcact
ggtcaattagaagacaaattgaaccagctaaatcttgcaattgttggccatgttgattct
gggaagtcaacactatcaggaagactactacaccttttggggcagatatctcagaaggaa
atgcacaaatatgaaaaagaggccaagcagcaaggaaaagggtcctttgcttatgcctgg
gcattggatgagagtgctgaggaaagagagaggggaataactatgacagtggctgttgcc
tactttaacacaaaaagttaccgtgttgtactgcttgattccccaggccatagagacttt
gtcccaaatatgatatcaggtgcaacacaagcagatgctgcaattctcgtagttgatgct
tcaataggtgcatttgaagctggcattgatgttagtggaggtcagacaagggagcatgca
caacttatcaaaagctttggggtggaccagataataattgctattaacaaaatggatgct
gtgggatactccaaagaacggtttgatacaattaagaatcaactaggaacatttcttcgt
gcttgtaagtttaaagattcatcagtattgtggattcccctgagtgccatgcaaaaccaa
aatttggtgacaagtccttctgatgcaagattgttgtcctggtttcaaggtccatgcctt
ttagacgccatagactctctccaacctccccaaagagattactcaaagcctatattaatg
ccgatatgtgatctcgttaaattaccctcacaaggacaggtgtcagtatgtggaaagttg
gagacaggagctcttcaaactggagataaggttctagttatgccatcaagagaaatggca
acagtgcgttctttggaacataattctcaggtctgtaacagtgcaaaagccggagacaat
gtcactgttaatctacaaggtatagatgtgaatcgtgtaaaggcaggggatgtgctgtgc
caccctgaatatcctattgctgttacaaatcatttggaactgaagattcttctcctggat
attgctgttccaattttaattggctctcagttggaatttcatgtacaccatgttaaggag
gctgcaagagtagtgaggattttgtccttgcttgatccaaagactggaaaggagaccaag
aaatcacctagatgtcttctagcaaagcagaatgctataattgaggtagttttgcaaggg
atgatttgcgttgaagagcattctaaatgtaagggtcttggaagggtgtccctcagagca
tcaggaagaaccatcgctcttggtcttgtgactcgagttctagagaagaaggaatag

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