KEGG   Solanum tuberosum (potato): 102603830
Entry
102603830         CDS       T02981                                 
Name
(RefSeq) coatomer subunit beta'-1-like
  KO
K17302  coatomer subunit beta'
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sot04131]
    102603830
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sot04147]
    102603830
Membrane trafficking [BR:sot04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    102603830
Exosome [BR:sot04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   102603830
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th PEP5_VPS11_N TPR_GEMI5 Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_SPT8 WD40_RFWD3 WD40_like Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 WD_LRWD1 TPR_8
Other DBs
NCBI-GeneID: 102603830
NCBI-ProteinID: XP_006346584
LinkDB
Position
Un
AA seq 925 aa
MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQTQTMAKSFEVTELPV
RSAKFIPRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMRSSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKVIWAKHNEVQTVNIKSVGADYEVADGERLPLAVKELGSCDLYPQNLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFSKSFQ
EKKSIRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSAHLDSGKSVDEQGVEEAFELLNEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVVGYTLLLGLIEYKTLVM
RGDWDRANEVLPSIPKEHHNSVAHFLESRGMIEEALEVATDPDYRFELAIQLGKLEIAKD
IAVVAQSESKWKQLGDLAMSSGRLETAEECLKHANDLSGLLLLYSSLGDAEGITLLASFA
KEHGKNNVAFLCMFMLGKVEECIQLLVDSNRIPEAAFMARSYLPSKVPEIVSIWRKDLSK
VNQKAAEALADPEEYPNLFEHWQIAHAVEARVAEERGVYPPAADYGNYADRPTTNLVEAF
SNLRMDEEPHENGELDHEAAELNGDEVLERGEDDLQQEGQEERGEDDLQQEGQEEAVVVD
ADSTDGAVLVNGNEGDEEYVLTPHH
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgcctctgaggttggagattaagagaaaacttgctcaaagatcggaaagggtaaagtca
gtggatctacatccttccgagccatggatattggcaagtttgtattcagggactgtatgc
atctggaactaccagacccagacaatggctaaatcattcgaagttactgaattaccagtt
aggtcagcgaagtttataccacgcaagcaatgggttgttgctggtgctgatgacatgttt
attcgtgtttacaattacaataccatggataaagtcaaagtattcgaggcacacacagat
tatattaggtgtgtggctgtccatcctacactaccatatgtgctgtcatcatctgatgac
atgctaataaagctctgggattgggagaagggatggttatgcactcaaatatttgaaggt
cattcccattatgtgatgcaagtcacctttaatccgaaagacaccaatacttttgctagt
gcatctcttgatcggactataaagatttggaaccttggctctcctgatccaaatttcacg
ctggatgctcatcttaaaggtgttaattgtgtagactatttcaccgggggtgataaacct
tatctaattactggttctgatgatcacactgctaaggtgtgggactatcagacaaaaagt
tgtgttcagactcttgaaggccacacccacaatgtctctgctgtatgttttcatcccgag
cttccgattataattacaggttctgaagatggtactgttcgtatatggcactcaaccact
tatagacttgagaacactttgaattatggtcttgaaagagtatgggcaattggttacatg
agaagttcaaggagggttgtaattggttatgatgagggaaccatcatggtgaaacttggt
cgagaagtacctgttgccagtatggataacagtggaaaagttatttgggctaagcacaat
gaagttcagactgttaacatcaagagtgtaggggcagattatgaggttgctgatggagaa
agactgcctttggctgtcaaggaattgggatcctgtgacctctacccacaaaatttgaag
cataatccaaatggaaggtttgtggttgtttgtggagatggagaatatatcatatatact
gctttggcttggagaaataggtcatttggctcagctctggaatttgtttggtcttcggat
ggagaatatgctgtgagggaaagtacttcaaagattaagattttcagcaaaagtttccag
gagaagaagagcatccgacctactttctctgctgagcgcatctatgggggtactttattg
gcaatgtgctcaaatgatttcatttgtttctatgattgggctgagtgcaggttgatacgg
agaattgatgttaatgttaaaaatctatactgggccgacagtggtgatctggtggcaatt
gcaagtgatacatcgttctacatacttaagtataatcgagatgtggtttctgctcattta
gatagtggaaaatcagtagatgaacaaggtgttgaagaagcttttgaacttcttaatgag
atcaatgaacgggtcaggactgggatttgggttggggattgcttcatttacaataattct
tcctggagacttaactattgtgttggtggtgaggtgaccacaatgtttcaccttgatcgg
cccatgtacctactgggatatcttgctaatcagagcagggttttcctgattgacaaggag
tttaatgttgtgggatatactttactccttggcttgattgagtacaagacacttgtgatg
cgtggtgactgggacagagcaaatgaggtcttaccatcaattcctaaggagcatcacaac
agcgttgctcatttcttggaatcacgcggaatgatagaggaagcattagaagttgctaca
gaccctgactacagatttgaactagctatacagctaggtaaattagagatcgcaaaggat
attgccgtagtggcacagagtgagtccaaatggaagcagttgggtgacctagccatgtct
agtggaaggcttgagacggcagaggagtgtttgaagcatgcaaatgacttgagtggtttg
ttgctactctattcttctcttggagatgctgaaggaataactctactagcttcttttgcc
aaagagcacgggaaaaacaatgttgcattcctttgcatgttcatgttgggtaaagtggag
gagtgcattcagctgttggttgacagcaatcggatacctgaggctgcatttatggcaaga
tcttatctgcctagtaaggttcctgaaatagtttcaatttggagaaaggacctcagtaag
gttaaccagaaagcagcagaagctttggctgaccctgaagaatatcctaacctgtttgag
cactggcaaattgcacacgctgttgaagctagagttgcggaggaaaggggtgtctatcca
ccagcggcagattatggaaattatgctgatagaccaactactaaccttgtagaagctttc
agcaacttgagaatggatgaagaacctcatgaaaacggagagttggatcatgaggctgca
gaactgaatggtgatgaggtgctagaacggggtgaagatgaccttcaacaggagggccaa
gaagaacggggtgaagatgaccttcaacaagagggccaagaagaggctgttgtggtggat
gccgactctactgatggtgcagtactcgttaatggaaatgagggtgatgaagagtatgtt
cttacaccacatcattag

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