Solanum tuberosum (potato): 102603942 Help Entry 102603942         CDS       T02981                                  Name (RefSeq) uncharacterized LOC102603942   KO K06100   symplekin Organism sot  Solanum tuberosum (potato) Pathway sot03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:sot00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     102603942  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sot03021]     102603942    03019 Messenger RNA biogenesis [BR:sot03019]     102603942 Transcription machinery [BR:sot03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      102603942 Messenger RNA biogenesis [BR:sot03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      102603942     U7-dependent histone pre-mRNA processing factors      102603942 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_EZ HEAT_2 Adaptin_N Motif Other DBs NCBI-GeneID:  102603942 NCBI-ProteinID:  XP_006365596 LinkDB All DBs Position Un AA seq 1315 aa AA seqDB search MVGMMSPISRERITSLLNAAKFASDVPSKLHSLRRLKDELSGAGGPLLKEFLPTLIDLVS DRFSPVRKLTIQMVGCIGFEHGELLPDIIPVLISALKDDTPAVARQAITCGIGIFRCTLV KVAIQGLFSSQLDGSLESAWALMLKFREEIYTMAFQPASDGRKLLALKFVESVVLLYTPD PSVGSEPPPALDIKGKFEQFNVSWLRGGHPVLDIGDLSGKASQGLGLLLDQLRSPAVKSI TNLMIIVVIKCLSEIATKRPAFYGRILPVLLSLSPSSSDSNKMHVSGVYRALKIAFISCL HCTHPGAAPWRDRLEGALREKRAGVQAEPIVSQDSQNNGDTELKDVSSILEDSKPSIKSS AGTKRSGVEHNAELIDDNLSKKRMRSAPIVSKAPKQEPSGNQERVSAGGSTTTRSDGDNV NLQPLVAMFGTLVAQGEKAAASLDILISSISADLLADVVMANMRNLPSNQPKIVDDEEPP LKPEIESDFRRLSLLLTDTISQSSMLAEKDERADQSLVSIEPELQKIKGGEEHLDPVTTN VTSDALNCASEEAPEYVTEPLSSTKSTPLLIENDVSSLQCDVADIEKTEDSIPGLDSVAL KDEASELVAVSAGPTEVEDGTQDQGSSVVRSSLEVVPSNSTDRSEELSPKAAVTDVTSMN SSTATSIGLSPQLLLPKISAPVINLSEEEKDNLQKSAFTRVIDAYKQIAIAGGSQVRFSL LAYLGVEFPSELNPWKFLQTHILSDYMNHEGHELTLRVLYRLYGHAEEDQDFFSSTAAAS VYETFLLTVAETLRDSFPASDKSLSRLLGEAPHLPNSTLKLLESFCCPGSCEKDEKELHS GDRVTQGLSTVWNLIMLRPLMRDACLKIALQSAVHHLEEVRMKAIRLVANKLYPLTSISQ QIELFANEMLMSVSTVDHKADSNGDGSDPALQKDSGSEKPSEGPSFSISNPLQSSTSGSK SPFSIAEGQRRISLYFALCTKKHSLFGQIFVVYSGASEAVQQAIHQQIHMLVRTIGSSSE LLEIISDPHSGSEKLLIQVLQTLTEGIVPSLQLITTIRKLYETKVKDVELLIMILPFLSK DEVLLLFPHVVNAPLDKFQGALLRILQGSTHSGPVLTPTEALIAIHRIDPEREGIPLKKV TDACNACFEQREIFTQQVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPSLVDFIMEILSR LVSKQIWKYPKLWVGFVKCALLTRPQSFGVLLQLPPAQLENALGRTPALRAPLVAHASQV HIKSSLPRSVLTVLGIESDAQVSSQAPPNQSQTGDIDNSDKEAGTEKSRDSSVVS NT seq 3948 nt NT seq  +upstreamnt  +downstreamnt atggtgggaatgatgtctccgatttccagagaaaggataacgagtttactcaatgctgcc aagttcgcttccgacgttccatcgaagcttcatagcttgcgccggctcaaagatgagctc tctggcgctggcggtcctttgctcaaagaattcctccctactctcatcgacctcgtttcc gatcggtttagtccagttcgtaaattaaccattcagatggttggttgtattggattcgaa catggagaattgttacctgatatcatacctgtgttgatctctgccttgaaggatgatacc ccagctgttgctcgacaagcaatcacttgtggaattggtatatttcggtgtactctagtc aaagttgcaatccagggcttgttttcaagtcaattggatggttctcttgaatcagcatgg gccttgatgctgaagtttagggaggagatatacacaatggcatttcagcctgcaagtgat ggaagaaaattgcttgcgctgaagtttgtggaatctgtagtgctactttacacacctgat cctagtgtcggttcggagccaccacctgctttggacattaaagggaagtttgaacaattc aatgtatcgtggcttcgcggaggtcatccagttctagatattggggatttgtctggtaaa gcaagccaaggtttgggtttattgcttgatcagcttagatctcctgcagtgaagtcaatt actaacttgatgatcattgtggtgattaaatgtctttcagaaattgcgactaaaaggcca gctttttacggtcgtattctgccagttctacttagcctgagtccttcaagctccgacagc aataagatgcatgtttctggggtataccgtgctttgaagatagccttcatttcttgcttg cattgtacacacccaggagctgcaccgtggcgggatcgactagaaggtgcactccgagaa aagagagcaggagttcaggcagaaccaattgtaagccaagattcccagaataatggggac acagagttgaaggatgtttcatcgatcttagaggattcaaaaccttcaattaaatcatct gctgggacaaagagatcaggggtggagcacaatgctgaactgatagatgataatctctct aagaagcgcatgcgatcggcgcctattgtctccaaggcaccaaagcaagagccaagtggg aaccaggagagagtttcagctgggggttccacaacaaccagatctgatggagataatgtt aatttgcaaccacttgttgcaatgtttggtacattagttgcccagggtgaaaaggctgca gcgtctttagatattttaatttctagcatatcagctgacttgctagctgatgttgtgatg gctaatatgagaaatctaccttcaaatcagccaaaaattgttgatgatgaagagccacct ctgaagccagagatcgaatctgattttagacgattatcattactgttgacagacactatt tcccagtccagtatgttagcagaaaaagatgagagagctgatcaaagtttggtctcgatc gagccagagctgcaaaaaattaaagggggagaagagcacctcgatcctgtcactactaat gttacatctgatgccctaaattgtgcaagcgaagaagcaccagaatatgtaactgagcct ctttcttctacaaagagtacccctctactaatcgaaaatgatgtctcatccttgcaatgt gatgtcgctgacattgagaaaactgaggattccatacctggtctagattctgtagctctc aaagatgaagcatcagagcttgtagctgtttcagctggtccaactgaagttgaagatggt actcaagatcaagggtctagtgtagttaggtcatctttggaagtagttccatcaaattca actgataggtcggaggagcttagtccaaaagcagctgtaactgatgtaaccagcatgaac tcatcaacagctacttctattgggctttctccgcagttgcttctacccaaaatatctgct ccagtcatcaacctctctgaagaagagaaggacaatttacagaagtcagctttcactcgt gtcattgatgcttacaagcaaatcgcaattgctggaggttctcaagtccggttttctctt cttgcctatttaggtgttgagtttccttcagagctaaacccttggaaatttctacaaaca catatattgtccgattatatgaatcatgaggggcacgagttgacattgcgtgtcctctac aggttgtatgggcatgcagaagaagaccaggatttcttttcttcaacagctgcagcatcc gtatatgaaacatttctacttacagtggcagaaacacttagagattcttttccagcttct gacaaatctctaagtagattgcttggtgaagctcctcacttaccaaattctactctcaag ttgttagagagcttctgttgtcctggtagttgtgaaaaggatgagaaggagttgcatagt ggagatcgagtcactcaaggcctcagtactgtgtggaacctgattatgctgagacctcta atgagagatgcttgtctcaaaattgctttacagagtgctgttcatcacttggaagaggtg cgcatgaaggcaatacggctggttgccaacaagctttatcctctgacatccatctctcaa caaatagaactctttgccaatgaaatgttgatgtcagtttcaactgttgatcataaagca gactcaaatggtgatggatctgatcctgcattgcagaaggattctggttctgaaaagccc tcggaaggaccatcattttctatctctaaccctcttcagtcatccacttctggaagcaaa tcaccattttctattgctgagggtcagcgacgcatatcgctctattttgcactgtgtact aagaagcactcactctttggccaaatatttgttgtatatagtggtgcatccgaggctgta cagcaggcaatacatcaacaaatccatatgctagttcggacaattggttcttcatctgag ttacttgagataatatcagatccacatagtggaagtgaaaaactattgatacaggttttg caaacattgactgaggggatagttccttccttacagttgataactaccatcaggaagcta tatgagactaaagtaaaggatgttgagctccttattatgatacttcctttcctgtcaaaa gatgaggttttacttctttttccacatgttgtgaatgctccattggataaattccaaggc gctctccttcgtattctacagggatcaactcactcaggtccagtgctaactcctactgaa gcattaattgctatccataggattgatcctgaaagagaaggcattccattaaagaaggtc acagatgcatgcaatgcttgttttgagcagagagagatattcacgcagcaagttcttgca aaggtcttgaaccaattggttgaacagattcctcttcctttgttgttcatgcggacagta ttacaagctattggtgcttttccatctctggtggatttcattatggagatcctctctcgt cttgttagcaagcagatatggaaatatccaaagctgtgggtaggatttgtgaagtgtgcc cttttgacccggccacaatcttttggagtgcttcttcagctacctccagctcagcttgaa aatgcattgggtagaacgcctgctctcagagctcctttagttgcacatgcaagccaagta cacataaaatcttcacttccaaggtctgtcttaacggttcttggaattgaatcggatgct caagtttcaagtcaggcacctcccaaccagtctcagacaggtgatattgacaattctgat aaagaagcaggcactgaaaaatccagggactcatcagttgtcagttaa

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