Solanum tuberosum (potato): 102604097
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Entry
102604097 CDS
T02981
Name
(RefSeq) DNA polymerase beta
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03410
Base excision repair
sot03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102604097
03450 Non-homologous end-joining
102604097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102604097
Enzymes [BR:
sot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102604097
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
102604097
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
102604097
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
HHH_5
NTP_transf_2
PTCB-BRCT
BRCT_3
Motif
Other DBs
NCBI-GeneID:
102604097
NCBI-ProteinID:
XP_006355938
LinkDB
All DBs
Position
Un
AA seq
530 aa
AA seq
DB search
MAPKKDKSPPSDPNGIFSSMVVFLIEAGVQSRRLQIWKQKLVQMGAKLEDRFSKNVTHVF
AMDANLLLQKLDKERLIRAKVKLLAYQWLEDSLIEGEKASEDLYVLSLQSGGGESLSPKA
DNDSHSRVTLKKSRISAEDVKNSSPRHMNDNKDRVDSQDTKSASSLASRSSSPEVTSPEA
IDSLNKPVGTSDSSSLYKPPDLNRNITQIFGKLLNIYRALGDDRRSFSYYKAIPVIEKLP
FKIESVDQVKHLPSIGKSMQDHIQEIVTTGKLSKLEHFEKDEKVKTISLFGEVWGIGPAT
ALKLYEKGHRTLDDLRNEESLTHSQRLGLKYFDDIQTRIPRNEVEEMEHLLQKVGEEILP
GVIIVCGGSYRRGKASCGDMDIVITHPDRKSHKGFLPKFVNRLKDMKFLREDLVFSVHST
EGTDSGVDTYFGLCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKG
FLLDDTGLYPATHSSGGKRTKGSASLKFETEKQVFEFLGFPALEPHERNL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagaaggataaatctccgccgtctgatcccaacggaatattttctagtatg
gttgtcttcttaatcgaagccggagttcaatcccggcggctacagatatggaagcagaaa
ttggtgcaaatgggggctaaattagaggaccggtttagtaaaaatgtcactcatgttttt
gctatggatgcaaatttgcttcttcagaaacttgataaagaacgtctgattcgcgccaaa
gttaaacttctcgcatatcagtggctagaggacagcttaatagaaggagaaaaagcatct
gaggatctgtatgtcttatccctgcaatcaggaggaggagagtcccttagtcctaaagct
gataatgacagtcattctagagttacactaaagaaaagtcgaatatctgctgaagatgtc
aagaattcaagcccaagacacatgaatgacaataaagaccgtgttgattcacaagatact
aaaagtgcctcttcactcgcatcacgctcttcaagcccagaagtgacaagtcctgaggca
attgattctcttaataagcctgttggaacatcagactcatcttcactttataagcctcca
gatttaaaccgaaatatcactcagatatttgggaagcttctcaacatatatagagcactg
ggtgatgaccggagatcattcagctattataaagctataccagttattgagaaattgcca
ttcaaaattgagagtgtggaccaggttaagcacctaccttctattggaaagtcgatgcaa
gatcatattcaggagatagtgaccactggaaagctgtccaaactggaacactttgagaag
gatgaaaaggtaaaaacaatcagcttatttggagaggtttggggtattggtccagccact
gccctaaaactttatgagaaaggacaccgaactcttgatgaccttagaaatgaggagtca
ctgactcattctcaaaggttagggttgaaatattttgatgacatccaaaccaggattcca
cggaatgaggtcgaagagatggaacatctgctacagaaagttggagaggaaattttgcct
ggtgtaattattgtgtgtggaggatcatatagacgtggaaaggcttcttgtggtgatatg
gatattgttattactcatcctgatagaaaaagtcataaaggctttcttcctaagtttgta
aaccgtttaaaggacatgaagtttttaagagaagatttggtcttcagtgttcatagcaca
gagggtacagattcaggagttgacacatattttggcctctgcacctaccctggtcgagaa
ctgcgacatcgtattgacttgaaggtgtatccaagggatatatatgcatttggactgata
gcatggacgggaaatgacgtcttgaatagaaggcttagattattagcagaatccaagggc
ttccttttggatgatacagggctatatccagctactcatagttctggtggaaaacggact
aaaggtagtgcaagcttgaagtttgaaactgagaagcaagtgttcgaattccttggattt
cccgcgctggaaccacatgaaaggaatttatga
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