Solanum tuberosum (potato): 102604132 Help Entry 102604132         CDS       T02981                                  Name (RefSeq) ATP-dependent RNA helicase DHX36   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism sot  Solanum tuberosum (potato) Pathway sot03018   RNA degradation Brite KEGG Orthology (KO) [BR:sot00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     102604132  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sot03019]     102604132    03012 Translation factors [BR:sot03012]     102604132 Enzymes [BR:sot01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      102604132 Messenger RNA biogenesis [BR:sot03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      102604132 Translation factors [BR:sot03012]  Eukaryotic type   Initiation factors    Initiation associated factors     102604132 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  OB_NTP_bind HA2_C Helicase_C dsrm DEAD HA2_N AAA_22 AAA_19 nSTAND3 T2SSE Dicer_dimer AAA_16 ATPase NACHT PhoH AAA_11 Motif Other DBs NCBI-GeneID:  102604132 NCBI-ProteinID:  XP_006341550 LinkDB All DBs Position Un AA seq 1205 aa AA seqDB search MPHTNLIQNCLKVRLKASQYLSTMSTSLQFCPNRFHFETNPLLYRSTQSVIPQKRCLHGS VGFFCSAKGSSSSSSSSSSSVVLRRKRHGSSSSSSYPSPYFYQQNLGYGRFAYDECESES ESDRETQSSKQLGESTLHNIEEWRWKLSMLMRKKDDQEVVSTDKKDRRDFEHISALATRM GLHCRQYEKTIVCSKVPLPNYRPDLDVKRPQREVVLHYGLQSRVGDLLEAHLSKKSVNKE NLTHNASLRGSNDNNSPNDKELHENEKPFARNVVVERILMRRSLEMRNKQGDWQGSPEGQ KMLELRKNLPAYKEREALLRAISENQVVVVSGETGCGKTTQLPQYILEAEIEAARGATCN IICTQPRRISAMSVAERVAAERGENLGESVGYKVRLEGMRGRDTRLLFCTTGILLRRLLV DRKLEGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFSSYYGGA PMIHIPGFTYPVRSHFLENILEMTKYRLTPYNQIDNYGQDKMWKMQKQTIRKRKTQIASA VEESLESADFGQYNPLTRDSLSCWNPDSIGFNLIEHVLCHICRNERPGAVLVFMTGWDDI NTVKDQLQAHPLLGDPSRVLLLACHGSMASAEQKLIFDKPEDGIRKIVLATNMAETSITI NDVVFVVDCGKAKETSYDAINNTPCLLPSWISKASARQRKGRAGRVQPGECYHLYPRCVY EAFADYQLPELLRTPLQSLCLQIKSLQLGSISDFLSKAIQSPEPLSVQNAIEYLKTIGAL DEDENLTVLGHNLSMLPVEPKLGKMIILGVVFNCLDPVLTVVAGLSARDPFLMPFDKKDL AESAKAQFSARNFSDHLALVRAYDGWKDAERQQSGHEYCWRNFLSAQTLKAMDSLRKQFL YLLKDIGLVDSIQSCNAWSNNEHLVRAIVCGGLFPGICSVVNKEKSISLKTMEDGGVLLY SNSVNAQEPQIPYPWLVFNEKVKVNSVFLRDSTAVSDSVVLLFGGSISGKALDGHLMMLG GYLEFFMNPSLANTYISLKRELNELVHKKLSDRNFDIGSHGELLEAVKLLVSEDQCEGKF VYGRKPSPKKSAKELQKNVISTKGSGGENPKSHLQTLLARAGHQSPSYKITQLKNNKFRA TVIFNGLNFSGQPSSSKKDAEKDAAAEALQWLTGETQSSSKAVEHMSALLKKSKSKNQLH STKWR NT seq 3618 nt NT seq  +upstreamnt  +downstreamnt atgcctcacactaatcttattcaaaactgcctcaaggtgaggcttaaagccagccaatat ctgtccactatgtccacttctctgcaattttgtccaaatcgttttcactttgaaacaaac cctctactttaccggtcgacacaatctgtaatacctcaaaaacgatgccttcatggaagt gttgggttcttttgttcagctaaggggtcttcttcttcttcgtcttcgtcttcgtcgtct gtggtgttgaggcggaaaagacatggctcatcttcgtcttcttcttatccttctccgtat ttttatcagcagaatttggggtatggaagatttgcttatgatgagtgtgagtctgagtcg gagtctgatcgtgaaactcagtcgtctaagcaattgggtgaatcaacccttcataacatt gaagaatggaggtggaagctaagcatgctaatgcgcaaaaaagatgaccaagaagtggtc tcaactgacaaaaaggatcgacgcgattttgagcatatatcagctttggcaactagaatg ggtttacactgccgccagtatgaaaaaacaattgtgtgtagcaaagtcccattgccaaat tataggccagatttggatgttaagcgtccacaaagagaggtcgtattacattatggatta caaagtagggtaggtgatcttcttgaagcacatctttctaaaaagtcagtaaacaaggaa aacctgacacataatgcttccttgagaggaagcaatgacaacaattctcccaatgataaa gaacttcatgagaatgagaagccatttgcacgaaatgttgtagtagagagaattctcatg cgaaggagcttggagatgcgtaataaacaaggagattggcagggatctcctgaaggccag aagatgctagaacttcgaaaaaatctccctgcatataaagagagagaggcattgcttaga gccatttctgagaatcaggtggtggttgtgtctggggaaactggatgtggtaagactacc caattgcctcagtacattttagaagctgagatagaagctgctcgcggagctacttgcaat atcatttgtactcaaccaaggcgaatatctgctatgtctgtcgctgaaagagttgctgca gagcgtggggagaatctgggagaatctgtgggctataaggttcggcttgagggcatgcga gggagggatacccgcctcttattttgcacaactggtattcttctgaggagattactggtt gatagaaagttggaaggtgtcactcacgttattgtagacgagattcatgaacgcggaatg aatgaagatttccttttaattgtccttaaagatctccttccccgtcgacctgaattgagg ctgattttgatgagtgctactcttaatgccgagctcttctcttcctattatggtggtgcc ccaatgatccatattcctggttttacttatcccgtccgaagtcattttctggaaaatatt ttggaaatgactaaataccggttaactccatataatcaaattgataactatggtcaagac aagatgtggaaaatgcagaaacagactattaggaagaggaagacccaaattgcttcagct gttgaggaatcgctagaatcagctgattttggacagtataatcctctgactcgggattca ctatcctgttggaatcctgattcaattggcttcaaccttattgagcatgtgctttgtcac atatgtagaaacgaaaggcctggtgctgtgttggtttttatgactggttgggatgacatt aatactgtgaaggaccagctgcaggctcatccactgttgggggatccaagcagagttttg ctgcttgcatgtcatggttccatggccagtgcagagcagaaattgatttttgataagcca gaggatggaatcaggaaaattgtgttagctaccaacatggctgaaacaagtatcaccata aatgacgtggtttttgtggtcgactgtggaaaggcaaaagagacatcttatgatgcaatc aacaacactccctgtttgcttccttcttggatttcaaaagcttccgctcggcaaagaaaa ggaagagctgggcgtgttcaacctggcgagtgttatcatctctatcccagatgtgtatat gaagcttttgcagattatcaactgccagagcttctgagaacacctttacagtccctatgc ctgcagattaaaagcttacaacttggaagtatttcagactttctatccaaggcaatccag tcaccagaaccactatctgttcaaaatgctattgagtatttgaagacaataggggctcta gatgaggatgaaaatctgacagtacttggacacaacctatcaatgcttccagttgagcca aaactggggaaaatgataatattaggtgtagtattcaactgcctggatccagttctgaca gttgttgctggtttaagtgctagagatccatttttaatgccatttgacaagaaggatctt gctgagtctgccaaagcccagttttctgctcgtaacttcagtgatcaccttgctcttgtt cgggcttatgacggctggaaagatgctgaaaggcagcaatctggtcatgagtactgttgg agaaatttcctttctgcgcaaactctcaaagcgatggactcccttcgaaagcaattttta tatctgcttaaggacattggtttagttgatagcattcagagttgtaatgcctggagtaat aatgaacatctggttcgagcgattgtatgtggtggactattccctggcatatgctctgtt gtgaacaaggagaagtcaatctcattgaaaacaatggaggatggtggagtccttttatac tctaattctgtcaacgctcaagaacctcaaattccatacccatggcttgtcttcaacgaa aaagttaaagtgaattcagtattcctgcgtgattctacagctgtatctgattctgtggta ctcttatttggcggaagcatttctggaaaagctctagatggacacttgatgatgcttgga ggatacttggagttcttcatgaacccctcactggcaaatacttacataagcttgaagagg gagcttaatgaacttgtccataagaaactctcggaccgtaattttgatataggaagtcac ggtgagctattagaagctgttaaattgctggtgtcagaggatcaatgtgaaggtaaattt gtctatggtcgtaaaccgtcccccaagaagtctgcaaaggagttacagaaaaatgtcatt tcaacgaagggcagtggtggtgagaatccgaagtctcatctccaaacgttgcttgctcgg gctggccaccaatcacccagttataaaataacacagctcaaaaataataagttccgtgcc actgtaatattcaatgggttaaatttttctggccagcctagcagtagcaagaaggatgct gaaaaagatgcagctgctgaagctctgcagtggttgactggtgagacccaatcctcttct aaagctgttgaacacatgtcagcacttctgaagaaaagcaagagtaaaaatcaacttcat agtacgaaatggaggtaa

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