Solanum tuberosum (potato): 102604140
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Entry
102604140 CDS
T02981
Name
(RefSeq) uncharacterized LOC102604140
KO
K15082
DNA repair protein RAD7
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102604140
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
102604140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_At1g61320_AtMIF1
LRR_NXF1-5
LRR_RPS2
SAM_Ste50p
Synuclein
Motif
Other DBs
NCBI-GeneID:
102604140
NCBI-ProteinID:
XP_006342371
UniProt:
M1AZT3
LinkDB
All DBs
Position
Un
AA seq
1058 aa
AA seq
DB search
MTLLRSREVTPAASKAKVSSKTLENHVLEPVTPSKSLETSVQPLCVVTPTSPSLASGDIP
PVARRRSLRLASKNGLSDVGEILNNEGKSKDFEIDNGDTGNSLKSDVGVESADLDEGDQD
LGVLDSEAVDEIGMNESDDIGNLVCSEGRIECVKEGKGDKNTSMEVQGEGNTKFLSLRSG
KKISKRAVEECSGGAVGDAGSVNQNDCDEKLSHGKLSEGMSNSCGSDGSSNKLQTSSVEP
SSVKRRKFSREEKSKGIVSEQCLPVVHSVNLESEVAFGMSIENTVPQSTCLPETIDLSVQ
GDGLAATLQNRDSKTRRISREEKGKQVMAGDDLCHGVDTLEGKSKHGAEKLVDEIVSRAI
NLTSQDGEQVADADGSATATRRVHRERFRDIARRNASRFAHFSSQAEQETDVAEEAAEEF
PQEVAETEEIEDWPGPFSTAMKIIRDREMNIKHQQQSKSEKSKIEVVWVPKTDQQCQSRK
LVVPSLHDLCMDILVKNADAITSLDGLPDALRHKICQSLCDSREMTYQFFRLLISGSPTE
IRIRDCSWLNEENFTQSFKGCDTNNFESFKGCDTNNFESFKGCDTNNFESFKGCDTNNFE
SFKGCDTNNFESFKGCDTNNFESFKGCDTNNFESFKGCDTNNFESFKGCDTNNFESFKGC
DTNNFESFKGCDTNNFESFKGCDTNNFESFKGCDTNNFESFKGCDTNNFESFKGCDTNNF
ESFKGCDTNNLVVLQLDQCGRCMPDYILLVTLARRPNNLPALTTLSLKGACRLSDVGLEA
IISAAPNLRSMNLSQCSLLTCDGISCLSNSLGSVLRELYLDNCEAIHPMLILPALLKLEH
LEVLSVAGIQTVCDAFIKEFVTNRGQSLREIILKGCMELTDRSLKDISQNCPGLRAIDLS
DLCKLTDSAIEHLATGCREVDNLKLCRNPFSDEAVAAYVETSGGSLKELSLNGVKKVSHN
TAMSLVKCSKNLISLDLSWCRNLTNEALGLIVDSCLSLEVLKLFGCSQVTSVFLDGHSNP
QVKIIGLKMTPILEHIEAPDSLQQGPLRYSAVPWHSDR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgacgctattgaggtctcgtgaggtgactccggcggcatctaaggctaaagtttcttct
aaaaccctagaaaatcatgtattggaaccggtaactccgtcgaaatctcttgagacttct
gttcagcctttatgtgttgtgactcctacttctccttctttggctagtggtgacattcct
cctgttgctagaaggaggagtttgagattggcttctaaaaatggtttgagtgatgttggt
gaaattttaaataatgaagggaagagtaaggattttgaaattgataatggggatactggc
aatagtttgaagagtgacgttggtgtagaaagtgcggatttggatgaaggtgatcaagat
ttgggggttttagatagtgaagcagttgatgaaataggtatgaatgaatctgatgatata
ggaaatttagtctgcagtgagggaagaattgaatgtgttaaagaggggaaaggggataaa
aatacaagtatggaagtgcagggtgaagggaatactaagtttttgagtttgcggtcgggc
aagaagatctctaagagagctgttgaagaatgcagtggtggcgctgttggtgatgctgga
agtgttaatcagaatgattgtgatgagaagttgtctcatggaaagctaagtgaaggaatg
tcaaacagttgcggttcagatggctccagcaataagttacagacaagttcagttgagcct
tctagtgttaagaggaggaaattcagcagagaagagaaatctaaaggtatagtttctgaa
cagtgtttgccagtggttcattcagtgaatttggaatcagaggtagcatttgggatgtca
attgagaacacagtacctcagtctacctgtttgcccgaaaccatagatctgtctgttcag
ggtgatggactagctgccactttgcaaaatcgtgattcaaagacaagaaggattagtaga
gaggaaaagggaaaacaagttatggctggcgatgatttgtgtcatggtgttgatacattg
gaaggaaaatccaagcatggggcagagaaactcgttgatgaaattgtttcaagagctatt
aatttgacaagtcaagatggagagcaagttgcagatgccgatggcagtgcaactgctaca
agaagagttcatagagaaaggtttagggatattgctagacgaaatgcttccaggtttgct
catttctcttcccaagccgaacaggagaccgatgtagctgaagaggctgctgaggaattt
ccacaggaggtagcggagactgaagaaatagaagactggcccggtcctttttcaactgct
atgaagattattagagatcgtgaaatgaacatcaagcatcagcagcagagtaaatctgag
aaaagtaagattgaagtggtatgggttcccaaaacggaccagcagtgccaatctagaaag
ctggttgttccctcattacatgacttatgcatggacattttagtgaagaatgctgatgca
atcacttcacttgatggtttacctgatgcacttaggcacaagatttgccagtcactgtgt
gactctcgggaaatgacatatcaattttttcgacttcttatcagtggatctcctacagag
atacgcataagggattgttcatggttgaatgaggagaatttcacacagagctttaaagga
tgcgacaccaacaactttgagagctttaaaggatgcgacaccaacaactttgagagcttt
aaaggatgcgacaccaacaactttgagagctttaaaggatgcgacaccaacaactttgag
agctttaaaggatgcgacaccaacaactttgagagctttaaaggatgcgacaccaacaac
tttgagagctttaaaggatgcgacaccaacaactttgagagctttaaaggatgcgacacc
aacaactttgagagctttaaaggatgcgacaccaacaactttgagagctttaaaggatgc
gacaccaacaactttgagagctttaaaggatgcgacaccaacaactttgagagctttaaa
ggatgcgacaccaacaactttgagagctttaaaggatgcgacaccaacaactttgagagc
tttaaaggatgcgacaccaacaactttgagagctttaaaggatgcgacaccaacaacttt
gagagctttaaaggatgcgacaccaacaacttggtggtgcttcaactggatcagtgtggt
cgctgtatgccagattatatcctattggttacattagctcgtcgtccaaacaatctccct
gcattgacgaccttatccttgaaaggtgcgtgtcgtctttcggatgttgggctggaggcg
atcatctctgcagcacctaatttaaggtcaatgaatcttagccagtgctctttgctgaca
tgtgatggaattagctgtttatctaattcattgggatcagttctgagagagttatatcta
gacaattgcgaagcaatacatcccatgcttattctgccagcattgctaaagctagaacat
ttggaagttctatcagtagctggaatccagactgtgtgtgatgcttttattaaagaattt
gtcactaatcgaggtcagagtctgagagagattattctgaaaggatgcatggaattgact
gatcgttctctgaaagatatttcacaaaactgtcccggattgcgcgctatagacctgagc
gacttgtgtaaattgaccgactctgcaattgaacatcttgccactggttgtagagaagtt
gacaatctaaaactctgtcgcaatccattcagtgatgaagctgttgctgcttacgtggaa
actagtgggggatctttgaaggaactatctctcaatggtgtcaaaaaggtttcacacaac
actgctatgtctctagtcaaatgttcaaaaaatttgattagtctggatttgtcttggtgt
cgcaacttgacgaacgaagccctgggattgattgttgatagctgcttatcgttggaagta
ctaaaattgtttggctgttctcaggttactagtgtttttctggatgggcactcaaatccc
caagttaagatcattggattgaagatgactccgatactagagcacattgaggcaccagat
tctctgcagcaggggccgctacgatattcagcagtgccatggcactctgacagatga
DBGET
integrated database retrieval system
