Solanum tuberosum (potato): 102604653
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Entry
102604653 CDS
T02981
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102604653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102604653
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102604653
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102604653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
102604653
NCBI-ProteinID:
XP_006358436
UniProt:
M0ZWV1
LinkDB
All DBs
Position
Un
AA seq
325 aa
AA seq
DB search
MRGIQLSFSNTQKLRLEKALAQLESLSSKLNSNATVIVADKIPVDEDAALKGHGTLEMGN
DVVASVCGVVERVNKLVYVRPLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLML
SSMNLPDGIQRRRTAVDELNMRSIFVENDVICAEVRGFQHDGSLHLQARSQKYGKLERGK
LLKIPPYLVKRRKQHFHHLDQYGVDLIFGCNGLIWVGEHVDVKDAMVEDQVNKSDPQNTH
SSSLPGSSEEPTDTPLERRQYICRIANAITVFSALGFMVNLDSVMETVTLSLSLNLGVHE
MLEAEFHVRVAEQEAEQRSTSKRRK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcatacagttatctttcagcaacacccaaaagctaagattagaaaaagcatta
gcgcaattggaatccctttcttcaaagcttaattccaatgccactgtcattgttgcagac
aaaattccagtcgacgaagatgctgccctcaaaggacatgggacgttggagatgggcaat
gatgttgttgcaagtgtatgtggagtggttgagcgagtgaataagcttgtttatgttaga
cctttaagggccaggtataagccggagattggtgatattatagtcggccgtgttattgag
gttgctccaaagagatggaggttggaaattaatttcagccaagacgctgtactaatgctc
tcctcaatgaatcttccagatggcattcagaggcggcgaacagcagttgatgaactcaat
atgcgaagcatatttgtggagaatgatgtcatctgtgctgaagtccgtggtttccagcat
gatgggagtctacacctccaagctagaagccaaaagtatggaaagcttgaaagagggaaa
ctactcaaaatccctccatatctagtgaaaaggcgtaaacagcatttccaccatctagat
cagtatggagttgacttgatttttggctgcaatggattaatttgggttggggaacacgtt
gatgtaaaagatgccatggtggaggatcaagtaaataagtctgatccacagaacacccat
tcatcaagcttaccaggttctagtgaagaaccaactgatacaccactggaaagaagacaa
tacatatgcaggatagcaaatgccatcacggtattctcagctttaggcttcatggttaat
ttggactccgtaatggagacagttaccctgagcttatctttgaaccttggtgtacatgag
atgcttgaagcagaattccatgttcgagttgctgagcaagaagctgaacaacggagcaca
tcaaaaagaaggaaatag
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