KEGG   Solanum tuberosum (potato): 102604653
Entry
102604653         CDS       T02981                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102604653
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102604653
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102604653
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     102604653
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N RRP40_S1
Other DBs
NCBI-GeneID: 102604653
NCBI-ProteinID: XP_006358436
UniProt: M0ZWV1
LinkDB
Position
Un
AA seq 325 aa
MRGIQLSFSNTQKLRLEKALAQLESLSSKLNSNATVIVADKIPVDEDAALKGHGTLEMGN
DVVASVCGVVERVNKLVYVRPLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLML
SSMNLPDGIQRRRTAVDELNMRSIFVENDVICAEVRGFQHDGSLHLQARSQKYGKLERGK
LLKIPPYLVKRRKQHFHHLDQYGVDLIFGCNGLIWVGEHVDVKDAMVEDQVNKSDPQNTH
SSSLPGSSEEPTDTPLERRQYICRIANAITVFSALGFMVNLDSVMETVTLSLSLNLGVHE
MLEAEFHVRVAEQEAEQRSTSKRRK
NT seq 978 nt   +upstreamnt  +downstreamnt
atgagaggcatacagttatctttcagcaacacccaaaagctaagattagaaaaagcatta
gcgcaattggaatccctttcttcaaagcttaattccaatgccactgtcattgttgcagac
aaaattccagtcgacgaagatgctgccctcaaaggacatgggacgttggagatgggcaat
gatgttgttgcaagtgtatgtggagtggttgagcgagtgaataagcttgtttatgttaga
cctttaagggccaggtataagccggagattggtgatattatagtcggccgtgttattgag
gttgctccaaagagatggaggttggaaattaatttcagccaagacgctgtactaatgctc
tcctcaatgaatcttccagatggcattcagaggcggcgaacagcagttgatgaactcaat
atgcgaagcatatttgtggagaatgatgtcatctgtgctgaagtccgtggtttccagcat
gatgggagtctacacctccaagctagaagccaaaagtatggaaagcttgaaagagggaaa
ctactcaaaatccctccatatctagtgaaaaggcgtaaacagcatttccaccatctagat
cagtatggagttgacttgatttttggctgcaatggattaatttgggttggggaacacgtt
gatgtaaaagatgccatggtggaggatcaagtaaataagtctgatccacagaacacccat
tcatcaagcttaccaggttctagtgaagaaccaactgatacaccactggaaagaagacaa
tacatatgcaggatagcaaatgccatcacggtattctcagctttaggcttcatggttaat
ttggactccgtaatggagacagttaccctgagcttatctttgaaccttggtgtacatgag
atgcttgaagcagaattccatgttcgagttgctgagcaagaagctgaacaacggagcaca
tcaaaaagaaggaaatag

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