Solanum tuberosum (potato): 102605063
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Entry
102605063 CDS
T02981
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sot04131
]
102605063
04121 Ubiquitin system [BR:
sot04121
]
102605063
Enzymes [BR:
sot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102605063
Membrane trafficking [BR:
sot04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
102605063
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102605063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Rad50_zn_hook
zf-RING-like
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
102605063
NCBI-ProteinID:
XP_006346709
UniProt:
M1A7B4
LinkDB
All DBs
Position
Un
AA seq
394 aa
AA seq
DB search
MSSTYWCYRCNRFYRVWSEESIACPDCNTGFVEEIEAPTRSTLSGSRRRRIPPAVMQTAA
RSTEQSPASGYGSGSSPGVRRNRRNTGDRSPFNPVIVLRGSTNGGGAGGEGGGGGGGGFE
LYYDDGTGSGLRPLPTSMSEFLLGSGFDRLLDQLAQIEANGIGRIENPPASKAAIESLPT
IEIIHSHIVTESCCAVCKEAFELGTEAREMPCKHLYHSDCILPWLSLRNSCPVCRHELPS
ESRDVVDPNRAPSEQSEQSVATNNEVEEAVGLTIWRLPGGGFAVGRLGRRGGERALPVVF
TEMDGGFNNNNNNGVPRRISWGSRGSESRQSGGFRRFFGNLFSCFGGVGSSGSSSSSDSR
INQSRSSSMSSVFLATARRRRGWGFEANNGVRRW
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaacgtattggtgttatagatgcaatagattttacagagtatggagcgaggaa
tcgattgcttgtcctgattgtaacacgggatttgttgaagaaattgaggctccgacccga
tccacgttgtccgggtcacggcgtcggcgtatccctccggcggtgatgcagacggcagcg
cggagtacggagcagtctcctgcttcgggttatggttccgggtcaagtccgggtgttcgt
aggaaccggaggaatactggtgaccggtcgccgtttaatcctgtgatagtccttcgtggt
tctaccaatggaggtggcgcgggaggggaaggtggtggaggcggtggaggggggtttgaa
ctgtattatgatgatggaaccgggtcgggtttgagacctttacctacgagtatgtctgag
tttttactcgggtcaggtttcgataggcttttggatcagctagcacagattgaagctaat
ggtattggaagaatagagaatccaccagcttcaaaagctgcaattgagtcgttgccaaca
attgagataattcattctcatattgttactgaatcttgttgtgcagtgtgtaaagaggca
ttcgagttaggcactgaggcccgcgaaatgccctgtaagcatttataccattcagattgc
atactcccatggctttcgttgcgcaattcgtgtccagtttgtaggcatgaattgccttca
gagagtcgggatgttgtcgatccgaatagagcaccaagcgaacagagtgaacagagtgta
gcaacaaataatgaggtggaggaagctgttggattgaccatatggagattacctggtggt
ggatttgctgttgggaggttaggtaggagaggtggggagagagctcttccggttgtattc
actgaaatggatggtggttttaataataataacaataatggagttccaaggaggatttca
tggggttctagaggaagcgaatcgcgacaaagtggtggctttaggaggttttttggcaac
ttgttttcgtgtttcggtggtgttggttcatcagggtcaagctctagttcagattctagg
ataaatcagagcagaagtagttcaatgtcatctgtctttcttgctacagcaagaaggcgc
agaggctggggtttcgaagctaataatggagttagaagatggtaa
DBGET
integrated database retrieval system
