Solanum tuberosum (potato): 102605219
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Entry
102605219 CDS
T02981
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
102605219
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
102605219
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
102605219
NCBI-ProteinID:
XP_006338131
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All DBs
Position
Un
AA seq
650 aa
AA seq
DB search
MIVPKHSQISTPVLQLLQQEDQVVIDNGIFQLRLTNPGGKIIGIQYNGIENLLELNNPIL
NGGFWDLNWSVPGTSGTRGKFDEIECNSFKVIVETEEQIELSFTRTWDPSLQGDQSPLTI
DIRYIILRDSPGFYSYAIYEHKENMPAFNLNETRIAFMLSIEKFRYMAMADDRQRLMPLP
EDRVPPRGKELAYPEAVLLVDPVEPEFKGEVDDKYQYSCENKDNKVHGFICLDPPVGFWQ
ITPSNEFRTGGPIKQDLTSHVNPTTLAMFMSTHYGGQDFVTQFESGEQWKKVFGPVFIYL
NSVADKNDTLSLWDDAKERMHKEVDCWPYSFASSEDFPKADQRGAIRGRLLVNDRCISKE
YLSAKGAFVGLAPPGNAGSFQKECKGYQFWTNSDDEGYFSIQNVRPGGYNLYAWVPGFIG
DYKYEKSIAITAASDVDIGELMYEPPRSGPTLWEIGIPDRSAAEFYVPDPDPQYINKLYI
NQPENKFRQYGLWERYADLYPDQDLVFTVGSSDYKKDWFYAQVTRKVGDKAYKPTTWQIK
FNIESIDHNGSYTLRIALSSATSSILEVRVNEEEANPPHFSSGLIGSDNTIARHGVHGLY
WLFNVEVTAGQLLQGENIIYLKQARSVSALNGIMYDYIRLEAPPLSAMLY
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaccaaagcattcacaaatatcaactccagttctgcaacttcttcagcaagag
gaccaagtggtaatagataatggcatattccaactcagattgacaaatccaggaggaaaa
atcattggaattcaatataatgggattgaaaatttgttggaactcaacaacccaatcttg
aatggagggttctgggacttaaactggagtgtacctggaacttctggaacaagaggaaaa
tttgatgagattgaatgtaatagttttaaagttatagtggaaactgaagaacagatagag
ctctcctttacaaggacatgggatccttcacttcagggcgaccaatccccgttaaccata
gacataaggtacataattcttcgtgattcgcctggtttttactcttatgctatttatgaa
cacaaagagaatatgccagcattcaacctcaacgaaaccaggatagctttcatgctcagc
atcgaaaagtttcggtacatggctatggcagatgataggcaaagactaatgccccttcct
gaagatcgggtacctccaagagggaaggaattggcatatccagaagcagtcctgctagtc
gatcctgtggagccagaattcaaaggagaagttgatgacaagtatcagtattcatgtgag
aacaaagataacaaagtccatggcttcatttgcttagatcctcctgtgggattctggcaa
attacgccaagcaatgagttcagaacaggtggacctatcaaacaagatcttacttctcat
gttaatccaacaactctggctatgttcatgagcactcattatggaggccaggatttcgtg
actcaatttgaatcaggcgaacaatggaagaaagtttttggacctgtttttatatatctc
aattctgtagcagacaagaatgatacactttccctatgggatgacgcgaaagaacggatg
cacaaagaagtcgactgctggccttatagttttgcaagttcagaagattttccaaaagct
gaccaaagaggtgccatccgtggtagattattagtcaatgacaggtgtataagcaaggag
tatttgtctgcaaagggtgcttttgtgggactagctccacctggaaatgctggatcattt
caaaaagaatgcaagggctaccaattctggacgaactcggatgatgaaggctatttctca
atccaaaatgttcgtccggggggctataacctctatgcttgggtacctggcttcattgga
gattacaaatatgaaaaatccatagcaattactgcagcttctgatgttgatatcggtgaa
cttatgtacgagcctccgaggagtggtcctacattgtgggaaatcggtatccctgatcgt
tctgctgcagaattctatgttcctgaccctgatccacagtatatcaacaaactttacata
aaccaaccagaaaacaagtttagacagtacggattatgggagagatatgcagatttatat
ccagatcaagatttggtatttacagttggaagtagtgactataaaaaagattggttctat
gctcaggtgacaagaaaagttggtgataaagcatataaacctacaacatggcaaattaaa
ttcaatatagaaagcattgatcataatggaagttacacacttcgtattgcgctctcatct
gcaacttcttctatattggaggtaagggtgaatgaggaagaagcaaatccaccacatttc
tcaagtggattgattggaagtgataatacaattgccagacatggagtccatgggctgtat
tggttgtttaatgtggaggtaactgcaggacaactacttcaaggagagaatatcatatat
ctcaaacaagcacggagcgtgagtgctctcaatgggattatgtatgactatattcgtcta
gaagctcctcctctttccgccatgctttattag
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