Solanum tuberosum (potato): 102605330
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Entry
102605330 CDS
T02981
Name
(RefSeq) crossover junction endonuclease EME1B-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
sot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102605330
03460 Fanconi anemia pathway
102605330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102605330
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102605330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Fungal_lectin
Motif
Other DBs
NCBI-GeneID:
102605330
NCBI-ProteinID:
XP_006357352
LinkDB
All DBs
Position
Un
AA seq
631 aa
AA seq
DB search
MSQPISVDILSDDEDDGGNGGYGYSVKQNDTIDLSTPLTIPFKKKQRTEKSNNWNPTVLV
IEDDDETPFRPSKSTPSFVADTPMSDLSKPEVSFVRCSLGSSSISDPKSSCLDLTPSMVA
ETPASELSKYSVPIVRCTKANAVSQNCSSSIIDHNKDGGIDGVICLESDNESENSGYHGT
WKEEQKVCSTEAVVKETEWSSRPFGSTFSLGIDNFMRMPEDVSHRNSTEAGPSRDHDHPD
EENDSLEPNDEVSRPKAKGKGNRSNKSSGDAATGKMRMSKEEQLRLKEEKRYQKEQEKLQ
KAAEKAEAAEQKKLEKEKQKWEKGKFAHKSIVAQIDTKVVELGSIGGHLLTRLAEKGLSY
QIKSNPIERSIVWSMSVPEELSKISSEVIDVPYVLFIFEAEEFCNLVNSKSLLSHVSRVQ
RLYPLHTVCYLTNKLLAYINKREQGQYKDPANHTGWKRPLIEEVLSKLTINFVKVHSRHC
VDEAELAEHVAGLTCSLASCQFRNKLTRLSVNANGSLIPKGCVDKNQIKKSPWLKALVAI
PKVQPRFAIAIWNKYPTMKSLLRVYMDPSKSVHEKEFLLKDLKVEGMVSDDRRLGEICSK
RVYRILMAQSGSSKTDDIECGADFFSQHSAE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgatctccgtcgacattctctccgatgacgaagacgacggtggcaacggc
ggatatggttactccgtcaagcagaatgacaccattgatctatcgacgccgctgacaatt
ccattcaaaaagaagcaaagaaccgaaaagtctaataattggaaccccacagttctggta
atcgaagatgatgatgagacgccgtttaggccttcaaagtccactccttccttcgtggct
gatactcccatgtctgatttatccaaacctgaagtctcctttgttagatgctcattgggt
tcctcttcaatttcggaccctaagtcttcatgtcttgatttgaccccatccatggttgct
gaaaccccggcatcagagctttcaaaatatagtgttccaatagtcagatgcactaaagct
aatgctgtttcgcagaattgctcttcttcaattatagaccacaacaaagatggcggaatt
gatggagtaatttgtttggagtctgataatgaatccgagaatagtggttatcatggtacc
tggaaggaggagcagaaagtttgttccacggaggcagttgttaaggagacagaatggagc
tccagacctttcgggtccaccttttctcttggtattgacaattttatgcgaatgccagag
gatgtttctcatcgaaattcgactgaagccggtccttctcgggaccatgatcatcctgat
gaagaaaatgattccttggagccaaacgatgaggtctcaagaccaaaagccaaaggtaaa
ggcaatagaagtaacaaaagcagcggggatgcagcaactgggaaaatgaggatgtcaaag
gaagaacagcttcgcctaaaggaagaaaagagatatcagaaagagcaagagaaattgcaa
aaggcagcagaaaaggctgaagctgctgagcagaaaaagctagaaaaggaaaagcagaag
tgggaaaagggaaagttcgcacataagtctattgtagctcaaattgacactaaagttgtg
gaactaggttcaattggaggccatttgctaacaaggcttgcggagaaaggtctttcctac
caaattaaatcaaatccaattgaaaggtctattgtgtggtcaatgagtgtcccagaggaa
ctatctaagatctcatctgaagttatcgatgttccatatgtattattcatatttgaggcc
gaagagttttgcaaccttgtgaatagcaaatcattgctgagtcatgtttcccgtgtccaa
cgcctttatcctcttcatacagtttgttatctcacaaacaagcttttggcatatatcaac
aaaagggaacaaggacaatacaaggaccctgccaatcatactggttggaaacgaccactt
atagaggaggttctgtcaaaattaacaattaactttgttaaggtgcattctaggcactgt
gtcgatgaagctgaattagctgaacatgtagctgggctgacttgcagcttagcttcttgt
cagtttagaaacaagttaacaagactatctgttaatgcaaatggttctcttattcccaag
ggttgcgttgacaagaaccagataaaaaagagcccatggttgaaagcattggtggctatt
ccaaaggttcagccacgatttgccattgccatatggaataaatatcccacaatgaaatct
cttttgcgtgtttacatggatccaagtaaatcggtgcatgagaaagaatttctgctgaaa
gatttgaaagtggaagggatggtgtcagatgatagaagattgggagagatttgttcaaag
agagtttacagaatattgatggctcaatctggaagcagcaagacagatgacatagagtgt
ggagctgatttcttcagtcaacattctgctgaatga
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