Solanum tuberosum (potato): 102605438
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Entry
102605438 CDS
T02981
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102605438
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102605438
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
102605438
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
AAA_19
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
102605438
NCBI-ProteinID:
XP_006354753
LinkDB
All DBs
Position
Un
AA seq
2088 aa
AA seq
DB search
MLFQLPRLTNALREPFDADQAYLHRKTILQNLKSRSTATSLEESELARKIVYKWDEASPE
LRQAYKQFIGVVVELMKGEIVSEEFREVAFSVYRLFSGPMVEGEEHRRIAEKKLDLQKLV
GYVVSDSLLSRVASLAQGLYELQNNHPGIETVSLPEVSNGTTDEVEFGSDLVFRLPARFL
IDVSLEDSDFLVEQDSAPSSSHETQNEHGSFSNFRESVSGGKFDLSWLSDACDEIVRGST
SQLPRDELAMAICRVLDSEKPGDEIAGDLLDLVGDGAFETVQDLIMHKKEIVDAIHHGLI
ELKADKMTTGGQSRAPSYAVQVTVQTESEKQIDKLRRKEERKHRRGTNNGVEGDLSTVSF
SSLLHASEKKYIFEDLVGHGEGTNTLGPTALPQGTIRKHYKGYEEVIIPPTPTASMKPGE
RLIEIKELDDFAQTAFHGYKSLNRIQSRIYHTTYNSNENILVCAPTGAGKTNIAMIAILH
EIKHHFRDGYLHKDEFKIIYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNEL
EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE
STQSMIRIVGLSATLPNYLEVAQFLRVNSETGLFFFDSSYRPVPLAQQYIGISEHNFLAR
NELLNEICYNKVIDSLKQGHQAMVFVHSRKDTVKTADKLVELSGKSTESELFKNDEHPQY
EILKREVFKSRNKEVVQLFEHGIGIHHAGMLRADRNLTERLFSQGLLKVLVCTATLAWGV
NLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYY
LRLLTSQLPIESQFINSLKDNLNAEVVLGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIG
WDEVMADPSLSLKQRDLISDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYTSVE
TYNEMLSRHMNESELINMVAHSSEFENIVVRDEEQNELEMLARTYCPLEVKGGPSNKHGK
VSILIQLYISRGSIDTFSLISDAAYISASLARIMRALFEICLRRGWCEMSSLMLDYCKAV
DRKIWPHQHPLRQFDKDISSEILRKLEEREADLDHLHEMQEKDIGVLIRYGPGGKVVKQC
LGYFPSVLLTATVSPITRTVLKVDLVIAPQFVWKDRIHGTALRWWILVEDSENDHIYHSE
LFTLTKKMARADPQKLSFTVPIFEPHPPQYYIRAVSDSWLQADALYTITFHNLALPETQT
SHTELLDLKPLPVTALGNGTFEALYKFSHFNPIQTQAFHVLYHTDRNILLGAPTGSGKTI
SAELAMLHLFSTQPDMKVIYIAPLKAIVRERMTDWRKRLVSQLGKKMVEMTGDYTPDLMA
LLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYIS
SQTERPVRFVGLSTALANAHNLADWLGVDETGLFNFKPSVRPVPLEVHIQGYPGKFYCPR
MNSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFINMPEDSLQ
MVLSQVTDQNLKHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPA
HLVVIKGTEFYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFL
YEPFPVESSLREQLHDHINAEIVTGTVSHKEDAVHYLTWTYLFRRLMVNPAYYGLEHAEP
GILNSYLSSLVQSTFEDLEDSGCIKITEDSVEPLMLGSIASQYYLKYTTVSMFGSKIGSD
TSLEVFLQILSGASEYDELPVRHNEENYNEKLAEKVPYAVDHNRLDDPHVKANLLFQAHF
SQSELPISDYVTDLKSVLDQSIRVIQAMIDICANSGWLSSTITCMHLLQMVMQGLWFDRD
SPLWMLPCMTDDLLNSLHKKGIASIQQLLDCPSESLRAITGSSAASKLYQDMRHFPRIQV
RLKIQPKESNGGKIFTLNIRLEDANTQRRTAKAFIPRYPKVKDEAWWLVLCNTSISELYA
LKRVSFSGRLQTHMGLPSTLTNFQGIKLILVSDSYIGFEQEHSIEGLA
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaacttcctcgcctgaccaatgctctccgggaaccatttgacgccgatcaa
gcttaccttcaccggaaaaccattctgcaaaatctcaagtctcgcagtactgcaacttca
cttgaagaatcagaacttgctcgaaagattgtgtataaatgggacgaagcttctcctgag
ttgcggcaagcctataagcagtttataggcgtggtggttgagttgatgaagggtgagatt
gtgtcagaggagtttagggaggtggcattcagtgtgtataggcttttcagtgggccaatg
gtggagggtgaggaacacaggcgtattgctgagaagaagctagatttgcaaaaacttgtt
ggctacgtagtttcagactcattactatcaagagttgcctctttagcacaaggattgtat
gagttgcagaataatcaccctggaattgagaccgtctctttaccagaagtgtctaatgga
accactgatgaagtggaatttggctcggaccttgtgttcagactgccagctcgtttttta
attgatgtttccttggaagattctgattttcttgttgagcaggatagtgcaccttcttca
agtcatgaaacacagaatgaacatggctccttctcaaattttagagaatctgtatctggt
ggaaaatttgatttaagctggttaagcgatgcctgtgatgagatagttagaggaagtact
tcgcagcttcctcgagatgaactggcaatggccatatgccgcgtacttgattcagagaaa
ccaggggatgagatagctggcgatttgcttgaccttgttggtgatggtgcatttgaaaca
gttcaggatcttatcatgcacaaaaaggaaattgttgatgcaatccatcatggactaatt
gaactgaaagctgacaagatgactacaggcgggcaatcgcgcgctcctagttatgccgtc
caggtaactgttcaaaccgagtctgaaaagcaaattgataaacttcgtcgcaaggaagaa
aggaagcataggcgaggaacaaataatggggttgagggtgatttgtccaccgtgagtttt
agttctttgcttcatgctagtgagaagaaatatatatttgaggacctcgttggtcatggt
gaagggacaaacaccttaggtcctacagcccttcctcaaggaactatcagaaaacactac
aaaggatatgaagaagtcattatccctccaacaccaactgcatctatgaaacctggggag
agactgattgagattaaggagctagacgactttgcgcaaacagcttttcatggctacaag
agtctcaaccgtattcagagcagaatttaccatactacgtacaatagcaacgaaaacata
ctagtgtgtgcccccactggggctgggaaaacaaacatagctatgattgctattctacat
gagatcaaacatcactttagagatggttacttgcataaggatgaattcaagataatctat
gttgcccctatgaaggcattagctgcagaggtcacatcaactttcagtcaccgattgtct
ccacttaatgtaactgtgagggaacttactggagacatgcagctttctaagaatgagctt
gaggaaacacagatgatagtgacaacacctgaaaagtgggatgttattactcgtaaaagc
agtgacatgtcgctctcaatgcttgtgaagctacttatcattgatgaagtccatttgcta
aatgatgatagaggccctgtgatagaagcattagtagcccgtacacttcgtcaggtggag
tccacacagtctatgataaggatagtgggcctttcagccacattacccaactatttggag
gttgcacagttcctaagggtgaattcagagacaggtttgtttttcttcgattcgagctac
cgtccagtacctcttgcacagcagtatattggtattagtgagcataactttttagcccgc
aatgaactgcttaatgagatatgctacaataaggttattgattccttaaaacaagggcac
caggctatggtttttgtccattcacgtaaagacacagtgaaaactgctgataagctggtt
gaattgtctggtaaaagtacagagtctgagctgttcaaaaatgacgagcatcctcaatat
gagattttaaagagggaagttttcaagtccagaaataaggaggtcgttcaactgttcgaa
catgggattggcattcatcatgctggaatgttacgtgctgacagaaacctaacagagaga
cttttctctcagggacttttaaaggtccttgtttgcacagcaactttggcatggggagtc
aatttgcctgctcacacagttgtgattaagggaactcaaatatatgatccaaaggctggt
ggatggcgagatctgggtatgctagatgttatgcaaatcttcggacgtgctggaagacct
cagtttgataaaagtggtgaaggcattataatcacttcacatgacaagttggcttattat
ttacgcctattgacaagtcaacttcctatagaaagtcagtttatcaattccttgaaagat
aatctaaatgctgaggtggtactgggtactgtaacaaatgtcaaggaagcttgtgcttgg
cttggttacacatatcttttcattaggatgaagatgaatcctttggcctatggcatcgga
tgggatgaggtcatggcagatccatcattaagcttaaagcaaagggatcttataagtgat
gctgctcgtgcacttgacaaagcaaaaatgatgcgttttgatgagaaaagtgggaacttc
tactgcaccgagcttggtcgtattgcaagccacttttatatccagtatactagtgttgaa
acttacaatgaaatgctgtcacggcatatgaatgaaagcgagttgataaatatggtagct
cattcttctgaattcgaaaatattgttgtccgagacgaggaacaaaatgagcttgagatg
ttggctcgcacatattgtccattggaagtcaagggtggtccatctaacaaacatggaaaa
gtttcaattcttattcagctgtacatctctcgaggatcaattgacacgttttcgctgatc
tctgatgctgcttatataagtgcaagcttggctcgtattatgcgagctctttttgagatt
tgtctgcgtagagggtggtgtgagatgtcttctctaatgttagactattgcaaggctgtg
gatcgcaaaatatggccccatcaacatcctcttagacagtttgataaggacatttcttca
gaaatattgaggaaacttgaagaaagagaggcagatttggatcatttacacgagatgcaa
gagaaagatattggagttttgattcgttatggacctggaggaaaggttgttaagcaatgt
ctcggatatttcccatcagtcctgttgactgctacagtcagtccaatcactagaacggtt
ctgaaggtggatttggttatagctccacagtttgtttggaaggatcgaattcatggcact
gcgttgcgctggtggattctggttgaggattctgagaatgaccacatttaccattctgag
ctcttcaccctcacaaagaagatggctagagcggatccacagaaactgtcctttacggtg
ccaatctttgagccacatcctccacagtactacattcgtgctgtttctgactcgtggcta
caagcagacgctttgtacacaataactttccacaaccttgctcttccagagacccaaaca
tcccacactgagcttctagatttgaaaccccttcctgtgactgcactcggcaatggaact
tttgaggccttgtataaattttcacacttcaatcctatacaaacacaggcttttcatgtg
ctgtatcacacggacagaaatatccttttaggagctccgactggaagtgggaagacaata
tcagctgagcttgctatgctccatttattcagtacacagcccgatatgaaggttatctat
atagcacctttaaaggctattgttcgggagagaatgacggactggagaaagcgtcttgtt
tcccaacttggaaagaagatggttgaaatgactggtgactacacgccggatctaatggct
ctcttgtcagcagacatcataatctccactcccgaaaagtgggatggtatcagtcgcaat
tggcacagtcgaagctatgtcactaaggttgggcttatgattttggatgagattcattta
cttggagctgatcgaggacccatacttgaggttattgtctcaaggatgagatatatatct
tctcaaacagagcggccagttcggtttgttggcctgtcaacagcattagcaaatgcacat
aatttggctgattggttgggtgtcgatgaaactggcctcttcaatttcaagccaagtgtg
aggcctgttcctcttgaagttcatattcagggatatcctgggaagttttactgcccgagg
atgaatagtatgaacaagcccacatatgctgctatatgtacacattcaccaacaaaacca
gttctaatctttgtctcctctcgtcgccaaacaaggcttacagcactggaccttattcag
tttgcggcttcagatgagcacccaaggcagttcataaacatgccagaagattcacttcag
atggttctttctcaagtcacagaccagaacttgaagcacaccttacaatttggaattgga
ttacaccatgccgggctgaatgataaagacagatcattggttgaggaactgtttgcaaac
aacaagatccaggtgttggtttgtacaagtacgttagcatggggtgtaaaccttcctgca
catttggttgttattaagggaacagagttttatgatgggaaagcaaaaagatatgttgat
ttcccaatcactgatatattacaaatgatgggtcgagctggtcgtccacaatatgatcaa
cacgggaaagctgttattcttgttcatgaacccaaaaagagcttttataaaaagtttcta
tatgaaccattcccagttgaaagtagtctgagagagcaactgcatgaccacatcaacgct
gagattgttactggaacagtatctcataaagaggatgctgtgcattatctcacttggact
tacttgtttcgtagattgatggttaacccagcttactatggcctagagcatgcagaacct
gggattctaaattcttatttgtctagcttggtgcaaagcacatttgaggatctagaagac
agtggatgcatcaagattactgaggacagtgttgaaccactgatgttgggctcaatagca
tctcagtattatctgaagtacaccactgtatcaatgtttggctcaaaaataggatctgat
acatcacttgaggttttccttcaaatactgtctggtgcttctgaatacgatgagctcccg
gtgaggcataatgaggaaaactacaatgaaaaattagctgagaaagttccatatgctgtc
gaccacaatcgcctggatgatcctcatgtgaaagcaaatctgctctttcaggctcatttt
tcccaatcagagttgccaatcagcgattatgtcacagacttaaagtctgtgctggatcaa
agtatacgtgttatccaggctatgatagatatttgtgccaacagtggatggctctcaagt
accattacctgtatgcatctgttgcaaatggtcatgcagggcttgtggtttgatagggac
tctcctctttggatgttaccatgcatgactgatgatctactcaactcattgcataaaaaa
ggaattgctagtatccagcagctgttggattgcccttcagaatcattgcgggctatcact
gggagttcagctgcctcgaaactgtatcaggatatgcggcatttccctcggattcaagtt
cgacttaaaattcagccaaaggaatctaatggtggaaagattttcaccttgaacattaga
ttggaagatgcaaatactcagcgaagaacagcaaaagcttttatcccacgatatccaaag
gtaaaagatgaagcttggtggttagtcctttgtaatacttccataagtgaactgtatgct
ctgaagagagtgtctttctctggtcgtttgcagacacacatgggtttgccatccactctg
accaatttccaggggataaagctcattctagtatcggattcttatattgggtttgaacaa
gaacactctattgaaggattggcttaa
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integrated database retrieval system
