Solanum tuberosum (potato): 102605539
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Entry
102605539 CDS
T02981
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102605539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102605539
03036 Chromosome and associated proteins [BR:
sot03036
]
102605539
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102605539
Coactivators
SAGA/TFTC/STAGA complex
102605539
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102605539
STAGA complex
102605539
TFTC complex
102605539
SAGA complex
102605539
SLIK complex
102605539
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
DSE1_N
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_TEP1_C
CFAP251_N
Beta-prop_WDR75_1st
ASA1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
PAC11
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
LisH_PAC1
PALB2_WD40
LisH
Beta-prop_ACSF4
Cytochrom_D1
LisH_SSDP
Motif
Other DBs
NCBI-GeneID:
102605539
NCBI-ProteinID:
XP_006353658
LinkDB
All DBs
Position
Un
AA seq
677 aa
AA seq
DB search
MDEEEIEKAVVAYLKKKGFKQTEIAFQEEQQLNKNSSSSIHNNNNSANSQIDPDLTKKIL
SFSEFETGPQRYQEEYSKLRSWAYSSLDLYKHELLRVLYPVFIHCFMELVARGHIQEARA
FFNSYREDHEMTHLRDLQKLEGVLSPSHLEEMEFAHSIRLSKVNIKMCQYSYDLLLQYLH
KTESITMLGIINERINFQVSPGQPGSISDDAEVVTLVASGHDASLINQKEVHWGLLEDSL
EERLEKTGGSVPDSEKFDGDPKEGEVEENKKKSVEGGKQGAPLKKLKKDKVGVATGKSSR
TESSTVTTTPRVKPELALPAIPVEVELSILEDLRNRVQLSNASLPSVSFYTFVNTHNGLN
CASISHDGSLVAGGFSDSSLKVWDMAKLGQQTGPSFLQGETDSPSSEHVLGSSGGRRCYT
LLQGHSGPVYSASFSPDGDFLLSSSSDSTIRLWSTKLNANVVCYKGHNYPVWDVQFSPAG
HYFASSSHDRTAKIWSVDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQ
SGDCVRIFIGHRSMILSLAMSPDGRYMASGDEDGTVMMWDLSSGRCITPLVGHSSCVWSL
AFSGEGSLLASGSADCTVKLWDVTTSTKAPLKEENKSGSNNRLRLLKTLPTKATPVYALH
FSRRNLLFAAGAFSKSA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaagagattgagaaagcagtcgtagcgtatttgaagaagaagggtttcaag
caaacggagattgcttttcaagaagaacagcaactgaataaaaacagctcttcttcaatc
cacaacaacaacaactccgcaaattctcagattgaccccgacttaaccaaaaaaatcctt
tctttctctgaatttgaaactggtccccaacgataccaagaagaatatagcaagcttcgg
tcatgggcctatagttcactggacttgtataagcacgagttgcttcgtgttttgtatcct
gtatttattcattgtttcatggaacttgtcgctagaggtcatattcaagaagcacgagcc
tttttcaatagttaccgtgaagaccatgagatgacgcatttgcgtgatcttcagaagtta
gaaggcgttctctcaccatcccatctagaggaaatggaatttgctcattctatacggctg
agcaaagtgaacattaagatgtgtcagtactcctatgatcttttgctgcaatacttgcac
aagacagaatctattacaatgcttgggatcatcaatgagcgcattaattttcaagtttct
cctggacagcctggctctatatctgatgatgcggaagttgtaactcttgttgcaagtggc
catgatgctagtctcataaatcagaaagaagttcattgggggctgcttgaagattcttta
gaagaacggttagaaaagacaggaggttcggttccagactcagaaaagtttgacggagat
cctaaggaaggagaagtggaagaaaacaagaagaagtcagttgaaggtggtaaacaaggt
gcacctcttaaaaaactaaagaaggacaaagttggggttgcaacagggaaatcttctcgt
acagagagtagcacggtgacaactacaccacgtgtcaaaccggaacttgctttacctgct
atacctgtagaggtagaactttctattctggaggacttgaggaaccgtgtacagttgagt
aatgcatcattgccctcagttagcttctatacatttgttaatacacataatggactaaac
tgtgcatcaatatctcatgatggatcactagtggctggtggattctcagactcatctctg
aaggtctgggacatggcaaagcttgggcaacaaactggtccatcttttttgcagggggag
actgattcaccttcaagtgagcatgtgcttggctcaagtggtggaagaagatgttataca
ttacttcagggccattcagggcctgtttattctgcatccttcagtccggacggggatttt
cttctttcttcatcatcagattcaacaattcgcttatggagcacaaagttaaatgctaat
gttgtttgctacaaaggtcacaattacccagtatgggatgtccagtttagcccagctgga
cattatttcgccagttcttcacatgaccgcactgcaaagatctggtctgtggacaggata
cagcctctgagaataatggccggacacttgtcagatgtagattgtgtgcaatggcatgca
aattgcaattacattgcaaccggatcaagcgacaaaactgtacgcttgtgggacgtccag
agcggcgactgtgtcagaattttcattggtcataggagtatgatcctatcattggcaatg
tctcctgatggtcgatatatggcatccggtgatgaagatggaacagtcatgatgtgggat
ctctcaagtggacgttgtattactcctttggtcggtcattcctcctgtgtgtggtcactt
gcttttagtggcgaaggctcacttcttgcatctggctctgctgattgcactgtaaaatta
tgggatgtaaccacaagcaccaaagcgccactaaaagaagagaacaaatctggaagtaac
aacaggcttcgtttattgaagaccttgcctaccaaagctactccagtctatgctttgcac
ttttctcgaagaaatcttctatttgccgctggggctttctcgaaaagtgcatga
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integrated database retrieval system
