KEGG   Solanum tuberosum (potato): 107058202
Entry
107058202         CDS       T02981                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107058202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    107058202
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     107058202
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     107058202
SSDB
Motif
Pfam: EXOSC1 ECR1_N ECR1_N_2 RRP4_S1 RRP40_S1 CHASE5
Other DBs
NCBI-GeneID: 107058202
NCBI-ProteinID: XP_015159108
LinkDB
Position
Un
AA seq 200 aa
MTMAMEAETQELVTPGQVLGKASQLKAGKGAYVSTENGTVYASLTGFRSLIPPPSDSVDQ
RSTVEVTGHKAHGAVPQPGSIVFARVTKVMARTASADIVCVDSKSVREKFTGIIRQQDVR
ATEIDKVDMHLSFRPGDIIRALVLSLGDARAYYLSTAKNELGVVSAESVAGGTMVPISWT
EMQCPLTGQVEPRKVAKVEA
NT seq 603 nt   +upstreamnt  +downstreamnt
atgacgatggctatggaagctgaaacccaagagttggtcacgccaggacaagtattaggt
aaagcatcacagttgaaagccggaaagggggcttacgtttcaactgagaatggcaccgtt
tacgcctccctcaccgggttccgttctcttatacctccgccttccgattctgttgatcag
agatcaacagtcgaagttactggtcataaagcccatggagcagttcctcagcctggttcc
attgtttttgctagagttactaaggtgatggctagaacggcttcggcagacatagtgtgt
gttgattccaaatctgtgcgtgagaaattcactggcattattaggcaacaagatgtcaga
gcaactgagattgacaaagttgacatgcatttgtccttccgaccgggtgatattattcgt
gcattggtgctatcacttggagatgcacgagcatattatctgtcaactgcgaagaatgag
ctgggtgttgtatctgctgaaagtgtggctggtggtaccatggttccaattagttggaca
gaaatgcagtgccctctaactggtcaagtagaaccgcgaaaggtggccaaagttgaagct
tga

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