Solanum tuberosum (potato): 107059089
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Entry
107059089 CDS
T02981
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Module
sot_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107059089
Enzymes [BR:
sot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107059089
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix_4
Motif
Other DBs
NCBI-GeneID:
107059089
NCBI-ProteinID:
XP_015160986
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All DBs
Position
Un
AA seq
230 aa
AA seq
DB search
MFHFDVYNCNNVTLSHVNIIAPSDSPNTDGIHISLSSNIRVFDSNIGTGDDCISIFAGSQ
NVNISGVTCGPGHGISIGSLGNKPNEVVKDVHVKNCTLIATQNGMRIKSWASSNVGEATS
ISFEDIIMDKVNNPIIIDQHYCPSHTCSFQKSLVQIKDVTFNNIRGTSNSLVAVYFNCSS
SLPCQKINLNDINLITDNNSKPTIASCANARGHATGIELPPSCLKPALES
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgttccatttcgatgtctataattgcaataacgtgacattaagtcatgtaaatataatt
gcaccaagtgatagtcccaacaccgatggaattcacattagtttatcgtcaaatattcga
gttttcgattccaacattggtactggagatgattgtatatctatatttgctggaagtcaa
aatgttaatatttctggagtcacttgtggccctggccatggaataagcattggaagctta
gggaataagccaaatgaagttgtgaaggatgtacatgtgaaaaattgtactcttattgct
actcaaaatggaatgaggattaagtcttgggcatcatcaaatgttggtgaagcaacaagt
attagttttgaggatattataatggacaaggtgaataatcctattattattgatcaacat
tattgtccttcacatacttgcagttttcagaaaagcttagtgcaaatcaaggatgtgaca
ttcaacaacataagaggaacttcaaattcattggtagctgtgtatttcaattgcagttct
tccttgccttgtcaaaaaatcaatcttaatgatattaatttgattactgataataactct
aaacctacaattgcatcgtgtgctaatgctagaggacacgccaccggcatcgagttacct
ccgagttgcttaaagcctgctcttgaatcttga
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