Solanum tuberosum (potato): 107059491
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Entry
107059491 CDS
T02981
Name
(RefSeq) uncharacterized LOC107059491
KO
K10865
double-strand break repair protein MRE11
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
sot03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107059491
03450 Non-homologous end-joining
107059491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sot03032
]
107059491
03400 DNA repair and recombination proteins [BR:
sot03400
]
107059491
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
107059491
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
107059491
BRCA1-C complex
107059491
NHEJ (non-homologous end-joining)
MRX complex
107059491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2045
SPG48
RNA_pol_Rpc4
Afi1
Motif
Other DBs
NCBI-GeneID:
107059491
NCBI-ProteinID:
XP_015161537
LinkDB
All DBs
Position
Un
AA seq
604 aa
AA seq
DB search
MMCLLSAPSHDPECQILFLIKETENVDEDEDENDEDVDLDDENGVDVYDENDEDDENDVD
VDDENDDESDEDDENPPTLYFCKPDNDSGRITVTLMANEFPIMFGGYLDMNRFEKYIIQS
SNASDDMLFYVHLYFNGKDHAMPYHFQYSKAAKPNRAFLGAFLISADSVFSAERWSWKKT
TMLNLLILPNTLGFLFVMLPPLPAKCDILNCLLSAPPHDPECQVIFQIETTLDDDDTNED
EDEHENDNSDEHENDNSDENSDGDENSDADGDADSINEDENDDDDEDENENLLTFYFCKP
GYNEEFHKQDVQSIIGDWRLGIWTVFKRKFYILIGMQNILTCLDIDNDSGRITATPMDNE
SPDLLKSYHPFYKDYLIQSSSNDMLLYIHLIGNGREFEMPYHFQWSNTIRILVATDCHLG
YMEKDEVRRHDSFQAFEEICSIAEKKQVRSCWLFLIAMMSGGDKMGACCDFVLLGGDLFH
ENKPSRATLVKAIEILRRYCLNDQPVQFQVVSDQTVNFANLFGHVNYEDPHFNVGLPVFS
IYGNHDDPAGVDNLSAVDILSACNLVNYFGKMDLGGSGVGQIALHPILIRKVCLWISSIR
GFCV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcctcttgtctgcaccttcccatgatcctgaatgtcaaattctctttctaatt
aaagagactgagaatgtcgatgaggacgaggatgaaaacgacgaggatgtggatctggat
gatgagaatggtgtggatgtgtatgatgagaacgatgaggatgatgagaatgatgtggat
gtggatgatgagaacgatgatgagagcgatgaggatgatgagaatccgcctactctttac
ttttgcaagccagataatgattcaggaagaataaccgttacactaatggctaacgaattt
ccaattatgttcggaggatacttggacatgaatcgctttgagaagtacatcattcaatcc
tccaacgcaagtgatgatatgttattttatgttcatttgtattttaacgggaaggaccat
gcaatgccataccactttcaatactcaaaagctgcaaaaccaaacagagcttttttagga
gcctttttgatctctgcagattctgttttttcagccgaaagatggagttggaagaaaaca
acaatgctcaacctccttattctgcccaacacccttggcttcttatttgtcatgctccca
ccacttcctgctaagtgcgacatattaaactgcctcttgtctgcaccacctcatgatccc
gaatgtcaagttatcttccaaattgagactactctggatgatgatgacactaatgaggat
gaggatgagcatgagaatgacaactctgatgagcatgagaatgacaactctgatgagaac
tcagatggggatgagaactctgatgcggatggggatgcagactctattaatgaggatgaa
aacgatgatgacgatgaggatgagaatgagaatttgcttactttttacttctgcaaacca
ggttataatgaagaatttcataaacaagatgtccaatcaattattggagattggcgtctt
ggaatctggaccgttttcaagagaaaattttatatattaatcgggatgcaaaatattcta
acttgtttggatatagataatgattcaggaagaataacagctacaccaatggataacgaa
tctccagatctgttgaaatcatatcatcctttttataaggattacctcattcaatcctct
tctaacgatatgttgttatatattcacttgattggtaacggaagagagtttgaaatgcca
taccactttcaatggagcaacaccattaggatcctggttgctacggactgtcacttgggc
tatatggagaaggatgaagtacgtaggcatgattcatttcaggcatttgaagagatatgt
tcaatcgcggagaaaaaacaggtgagatcgtgttggttgtttctgattgcaatgatgagt
ggtggagataagatgggggcatgctgtgactttgtgcttcttggtggtgatctgtttcat
gagaataagccatccagggcaacactggtgaaagccattgaaattcttcgccgctattgt
ctcaatgatcaaccggtgcaattccaagttgttagtgaccagacagtgaactttgctaac
ctatttggtcatgtaaattatgaagatcctcactttaatgtggggttgcctgttttcagc
atttatggcaatcacgatgatccagctggtgtggacaacctatctgcagttgacatcctt
tcggcatgcaatcttgtcaactattttggtaaaatggatctcggtggttctggtgttgga
cagatcgctctgcaccctattcttatcaggaaggtctgcttgtggatatcttcaataaga
ggcttctgtgtttga
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