Solanum tuberosum (potato): 107061912
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Entry
107061912 CDS
T02981
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03030
DNA replication
sot03410
Base excision repair
sot03420
Nucleotide excision repair
sot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107061912
03410 Base excision repair
107061912
03420 Nucleotide excision repair
107061912
03430 Mismatch repair
107061912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sot03032
]
107061912
03036 Chromosome and associated proteins [BR:
sot03036
]
107061912
03400 DNA repair and recombination proteins [BR:
sot03400
]
107061912
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107061912
DNA Replication Termination Factors
ELG1-RFC complex
107061912
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107061912
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107061912
Check point factors
HRAD17(Rad24)-RFC complex
107061912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
EnY2
DUF2959
RuvB_N
COMPASS-Shg1
Rep_fac_C
Motif
Other DBs
NCBI-GeneID:
107061912
NCBI-ProteinID:
XP_015167394
LinkDB
All DBs
Position
Un
AA seq
665 aa
AA seq
DB search
MSKNPSILRSKSVPCRISETQNVRSTNSDDSLKPSWHKKVDEERKRGSSSSKNSRSNNLD
EFNKRTAIQEEKRYSARSPYYKGLTDSSKEINRQKSLAGSTPGKDSSLLASSTSNSSKSN
LAIKVQEWSASYFVRKGKEERAFSFLNVSSGNKNIRDPSSSETKVIRTTIGEELGIHSKG
VRRRTKSRISQLDQGKPLRERASEMQTNNIVLLPAAPAPAPARPVTSPIKLSLPSPPPTP
LILQTSQAEEIESVLLPLPASSTQNVDDEKDTTNVKDMTVPEKQIDKRFTWADKYRPNAL
KDFLCNRNIALELKALAETDGSIRHFIFAGLPGVGKRTMIFALLRKIYGHDKVQARDKCK
VFHLKGESVPSIKVNVKESNKHLEINLSETKGYEKHVLVQLIKERKHKSSSRSAPPNPEN
CKAIILGEADKLSTDALLYIKWMIERYEGCYKVFFCCSDSTKLQPIKSICKVFHLQKPSD
DEIVDVLKFIAQQEGIELPHQMAVRIASNSKSNLRQAIRSFEATWHFNTSLTENQEIKTG
WEDDIAKIAKNIIKEQSPKQLYDIRGKLQNLIEHNVSAEFIFNTVFEELKSNLDDQFHKD
MDILKMKYNINSNDHDQGKSDNDAVKKIVHKFMKIEEFTAKFMSWYKIIVLKKGNQNPIL
SKGDI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatccatcgatcctgcgttcaaaatctgttccttgcaggatatcagaaact
caaaatgtcagatcaacaaattcagatgactcattgaaaccatcatggcataaaaaagtc
gatgaggaaagaaagagaggatcatcgtcttcaaaaaactcgaggagtaataacctcgat
gaattcaacaaaagaactgcaattcaagaagaaaagaggtactctgcaagaagtccatat
tacaaaggacttactgattcatccaaagagattaatcgacaaaagtcgttagcaggcagt
actcctgggaaagatagcagcttattagcttcttcaacaagtaacagttctaaatcaaat
ttagctatcaaggtacaagagtggagtgcgtcttactttgtacgcaaaggcaaagaagaa
cgagcattctccttcttgaatgtttcttcggggaacaagaacatccgtgatccttcttca
tcagagacaaaagtaatcagaacgacaatcggagaagaacttggtatacattcaaaagga
gttagaagaagaaccaaaagtagaatttcacaattagatcaggggaagcctttgagggag
agagcatcagaaatgcaaacaaataatatagtactactacctgcagcccctgcccctgca
cctgcacggccagtaacatcaccgataaaattgtcattaccatctccaccaccaactcca
ttaatattacaaacatcgcaagctgaagaaattgaatcagtactactaccattaccagct
tcatcaactcaaaatgtcgacgatgaaaaagataccacaaatgtgaaagatatgacagtt
cctgaaaaacagattgacaaaagatttacatgggctgacaagtataggcctaatgctctt
aaagattttctatgcaatcgaaatattgcactggaattgaaggctctggcagaaacagat
ggtagtattcgccatttcatatttgcaggactgccaggagtagggaaaagaaccatgata
tttgctctacttcgtaaaatttatggacatgataaagtacaggcaagagataagtgcaag
gtgttccacttaaagggagaatcagttcccagcatcaaagtaaatgtgaaggaatcgaac
aaacatcttgagataaatctctctgaaactaaaggctatgagaaacatgtcctagtacaa
ctaatcaaggagagaaagcacaaatcatccagcagatctgcacctccaaatcctgaaaac
tgtaaagctatcattcttggtgaggcagacaagctatcaacagacgcattgttatatatc
aaatggatgatagagagatatgaaggttgttataaggttttcttttgctgcagcgatagc
acaaagctccagccaatcaagtctatttgcaaagtttttcatcttcaaaaaccttcagat
gatgagattgtagacgtcttgaaattcatagcacaacaggaaggaatagaactaccacac
caaatggcagtgaggattgctagtaactctaaaagtaacctacgccaagcaattcgctct
tttgaagctacctggcacttcaacacttccttgactgaaaatcaagaaatcaagacaggg
tgggaagacgacattgcaaagatcgctaaaaacataattaaagagcaaagtccaaagcag
ctatacgatatccgtgggaaattgcagaatttgatagagcacaatgtatctgctgagttc
atctttaatactgtgtttgaagaactaaagagtaatttggatgaccagttccacaaagac
atggacattctgaaaatgaagtataatataaattcaaatgatcacgatcagggtaaaagt
gataacgatgcagtaaaaaagattgttcacaaatttatgaaaattgaagagttcacagct
aaattcatgagctggtataagattattgttctgaagaaaggaaatcagaaccccatcctc
agcaaaggggatatatag
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integrated database retrieval system
