Solanum tuberosum (potato): 4099985
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Entry
4099985 CDS
T02981
Symbol
rbcL, SotuCp029
Name
(RefSeq) RuBisCO large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00630
Glyoxylate and dicarboxylate metabolism
sot00710
Carbon fixation by Calvin cycle
sot01100
Metabolic pathways
sot01110
Biosynthesis of secondary metabolites
sot01200
Carbon metabolism
Module
sot_M00165
Reductive pentose phosphate cycle (Calvin cycle)
sot_M00532
Photorespiration
sot_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
4099985 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
4099985 (rbcL)
Enzymes [BR:
sot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
4099985 (rbcL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
4099985
NCBI-ProteinID:
YP_635647
UniProt:
P25079
A0A0N7CI26
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All DBs
Position
CP
AA seq
477 aa
AA seq
DB search
MSPQTETKASVGFKAGVKEYKLTYYTPEYQTKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYRIERVVGEKDQYIAYVAYPLDLFEEGSVTNMLTSI
VGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALFKAQAETGEIKGHYL
NATAGTCEEMMKRAVFARELGTPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEQDRSR
GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVKARNEGRDLAREGNEIIREAAKWSPELAAACEVWKEIVFNFAAMDVLDK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagagactaaagcaagtgttggattcaaagctggtgttaaagagtac
aaattgacttattatactcctgagtaccaaaccaaggatactgatatattggcagcattc
cgagtaactcctcaacctggagttccacctgaagaagcaggggccgcggtagctgccgaa
tcttctactggtacatggacaactgtatggaccgatggacttaccagtcttgatcgttac
aaagggcgatgctaccgcatcgagcgtgttgttggagaaaaagatcaatatattgcttat
gtagcttaccctttagacctttttgaagaaggttccgttaccaatatgcttacttccatt
gtaggtaacgtatttgggttcaaagccctgcgcgctctacgtctggaagatctgcgaatc
cctgttgcttatgttaaaactttccaaggcccgcctcatgggatccaagttgaaagagat
aaattgaacaagtatggtcgtcccctgttgggatgtactattaaacctaaattggggtta
tctgcaaaaaactacggtagagctgtttatgaatgtcttcgcggtggacttgattttacc
aaagatgatgagaacgtgaactcacaaccatttatgcgttggagagatcgtttcttattt
tgtgccgaagcactttttaaagcacaggctgaaacaggtgaaatcaaagggcattacttg
aatgctactgcaggtacatgcgaagaaatgatgaaaagagctgtatttgctagagaattg
ggcactccgatcgtaatgcatgactacttaacggggggattcaccgcaaatactaccttg
gctcattattgccgagataatggtctacttcttcacatccaccgtgcaatgcatgcggtt
attgatagacagaagaatcatggtatgcacttccgggtattagcaaaagcgttacgtatg
tctggtggagatcatattcactctggtaccgtagtaggtaaacttgaaggtgaaagagac
ataactttgggctttgttgatttactgcgtgatgattttattgaacaagatagaagtcgc
ggtatttatttcactcaagattgggtctctttaccaggtgttctacctgtggcttcagga
ggtattcacgtttggcatatgcctgctctgaccgagatctttggggatgattccgtacta
cagttcggtggaggaactttaggacatccttggggtaatgcgccaggtgccgtagctaat
cgagtagctctagaagcatgtgtaaaagctcgtaatgaaggacgtgatcttgctcgggaa
ggtaatgagattattcgcgaggctgccaaatggagcccggaactagctgctgcttgtgag
gtatggaaagagatcgtatttaattttgcagcaatggacgttttggataagtaa
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