Stenotrophomonas oahuensis: PDM29_00790
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Entry
PDM29_00790 CDS
T10110
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sou03016
]
PDM29_00790 (truB)
Enzymes [BR:
sou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PDM29_00790 (truB)
Transfer RNA biogenesis [BR:
sou03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PDM29_00790 (truB)
Prokaryotic type
PDM29_00790 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WNH52839
LinkDB
All DBs
Position
complement(161950..162858)
Genome browser
AA seq
302 aa
AA seq
DB search
MNRITFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEVVLGQTTDTDDSDGTVLRERPVPTISPAQLEAALAPLKGRIRQ
RAPIYSALKQGGEPLYVKARRGEAIEAPEREVEVHAIEVLDQQPTRLSLRVTCGSGTYIR
SIARDLGETLGCGAHIAGLRRLWVDPFRDAPMVTLDTLRQLVEQGDEAALDALLLPLAEG
LAHYPRVELDAEQARRFCMGQRLRNADWAQGGVAVYGPEGQIQGLGQVDETGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaatcacgttccgccgcctggacggcattctgctgctcgacaagtcgaccggc
atgagctccaacgccgcgctgcaggtggcccgccgcctgttccgcgccgagaagggcggc
cataccggcagcctcgacccgctggccaccggcctgctgccgctgtgttttggcgaggcg
accaagatcgccggcctgctgctgggctcggccaaggcttatgacgccgaagtggtgctg
ggccagaccaccgacaccgatgattccgacggcaccgtgctgcgtgaacgcccggtgccg
acgatcagccccgcacagctggaggccgccctggctcccttgaagggccgtatacgacag
cgcgcaccgatctattccgcgctcaagcaaggcggcgagccgctgtatgtgaaggcccgc
cgcggggaggccatcgaggccccggagcgcgaggtcgaggtacacgcgattgaggtgctg
gaccagcagccgacgcggttgagcctgcgcgtgacctgcggttcaggtacctacatccgc
agcattgcccgtgacctgggcgaaaccctgggctgcggcgcgcatatcgccggcctccgg
cggctgtgggtggacccgttccgcgacgcgcccatggtcaccctcgacaccctgcgccag
ctggtggagcagggcgacgaggccgccttggacgcactgctgctgccgctggcggaaggt
ctggcgcattacccccgcgttgaactggatgctgaacaggcgcggcgcttctgcatgggc
cagcgcctgcgcaacgcagactgggcgcagggcggagtggccgtgtatgggccggagggc
cagatacagggccttggacaggtcgatgagaccggtctgctggctccgcagcggcgcttc
aacctgtga
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