Stenotrophomonas oahuensis: PDM29_01330
Help
Entry
PDM29_01330 CDS
T10110
Name
(GenBank) CHASE2 domain-containing protein
Organism
sou Stenotrophomonas oahuensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE2
GGDEF
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
WNH52938
UniProt:
A0ABY9YQH3
LinkDB
All DBs
Position
291926..293563
Genome browser
AA seq
545 aa
AA seq
DB search
MSSRRLPHPLSWSRRIALAVLVGLLAAALSHGQVLWKPDEALYDRWVGHWSYAPDPRLLI
IAIDAASVKKLGPLPWPRATHAQLLDRLTEAGSTRVAMDLLLSDPDPDASQDAELSAAIR
RHGQVVLPVVALPTQRPGVSEELLPIPMIAANATTLGHSDVEVDPDGISRSLYLTAGVGS
PHWPALGAALAARRGLLPGRLDPGPDNASPWQWRRNHLVRVRFAGPARTFPQLSYVDVLE
GRVDRTVLRGRLVMVGVTTPAEAPLLLTPSAPVRGLSGSEYQANVAAMLMDNKVIRLTPV
WAQTFLSGVLAALFGLLLTLPRARLAALIAIPSVLLGSFLLLRLGYVWFAPMALAVSMGA
VLAAWLGWCALHWRRFIHIDPVTQLGTRRRFDHHLEEEHGAAQRLQRPLSVVLVELDHFN
ALVDLHGLNAGNAALRAIASQLTAHARRPHDISARLGTNRFALLLPETNGDGTLQVVEDL
IARVRGLNVPIQLGQTTPVTVSVGVYVRVPDASSTPKAIMQGAEAALQRARAAGNDGYAT
DIVDY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcacgtcgactgccgcacccgttgtcgtggtcccggcgcatcgccctggcggtg
ctggtaggcctgctggccgccgcactcagccacggccaggtgctgtggaaaccggatgaa
gccctgtacgaccgctgggtcggccactggagctacgcgcccgatccgcgcctgctgatc
attgccatcgacgcggccagcgtgaaaaagctgggcccgttgccctggccgcgcgccacc
catgcgcagttgctggatcgcctgaccgaggccggcagcacccgtgtggcaatggacctg
ctgctgtccgaccctgaccccgatgccagccaggacgccgagctgtccgccgcgatccgc
cgccacgggcaggtggtcctgccggtggtcgccctgccgacccagcggcctggcgtttcc
gaggaactgctgcccatcccgatgatcgccgccaacgcgaccacgctggggcacagcgat
gtcgaggtcgacccggacgggatcagccgcagcctgtacctcaccgccggcgtcggttca
ccgcactggcctgcactgggtgcggcactggcagcgcgccgcgggctgctgcccgggcgg
ctggatcccggcccggacaatgcctcgccctggcaatggcggcgcaaccatctggtgcgg
gtgcgctttgccggcccggcgcgcaccttcccgcaactgtcctacgtggatgtactggaa
ggccgggtcgaccgcaccgtgctgcgtggtcgcctggtgatggtgggcgtgaccacgccc
gccgaagcaccgctgctgctcacccccagtgcgccggtgcgcggactcagcggcagcgag
taccaggccaatgtggctgcgatgctgatggacaacaaggtgatccggctgacgccggtg
tgggcacagacgttcttgagcggggtgctggccgctctattcggcctgctgctcaccctg
ccacgcgcacgccttgcagcgctcattgcgataccgtcggtgctgctgggcagcttcctg
ctgctgcgtctgggctatgtgtggtttgcgcccatggccctggccgtgagcatgggcgcg
gtgctggcagcgtggctgggctggtgcgcgctgcattggcggcgcttcatccatatcgac
ccggtaacccagctgggcacgcgccgccgcttcgatcaccatctcgaagaggagcacggt
gccgcccagcgcctgcaacgcccgctgagcgtggtgctggtggagctggaccacttcaac
gcactggtggacctgcacggactgaacgccggcaacgccgccctgcgcgccatcgcgtca
cagctgaccgcacacgcacgccgcccacacgacatcagcgcacggctgggcaccaaccgt
ttcgcgctgctgctgccggaaaccaacggcgacggcacgctgcaggtggtggaagacctg
attgctcgggtgcgtggattgaacgttccgattcaactgggacagaccacgccggtaacg
gtatcggtaggcgtgtacgtacgtgtccccgacgcgagcagcaccccgaaggccatcatg
cagggcgcagaagcagcgctgcagcgcgcgcgtgccgctggtaacgacggctacgcaacg
gacatcgtcgactactga
DBGET
integrated database retrieval system
