Stenotrophomonas oahuensis: PDM29_02290
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Entry
PDM29_02290 CDS
T10110
Name
(GenBank) Hpt domain-containing protein
KO
K06596
chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
Organism
sou Stenotrophomonas oahuensis
Pathway
sou02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDM29_02290
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sou01001
]
PDM29_02290
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sou02022
]
PDM29_02290
02035 Bacterial motility proteins [BR:
sou02035
]
PDM29_02290
Protein kinases [BR:
sou01001
]
Histidine kinases
CheA family [OT]
PDM29_02290
Two-component system [BR:
sou02022
]
CheA family
ChpA-ChpB/PilGH (chemosensory)
PDM29_02290
Bacterial motility proteins [BR:
sou02035
]
Pilus system
Twitching motility proteins
PDM29_02290
Chemosensory pili system proteins
PDM29_02290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hpt
Response_reg
CheW
HATPase_c
H-kinase_dim
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
WNH53123
LinkDB
All DBs
Position
complement(514579..521130)
Genome browser
AA seq
2183 aa
AA seq
DB search
MSTLRDAMSHAALGWVKPELDETLRQVRNEVEYFVEDPADGSRMRFCAGYLHQVQGTLRM
VELYAPAMVAEEMEQLANAVGAGQVPDRDEACATLMRGSVLLPDYLERLQNGHRDIPIVL
LPLLNEIRAARGAPGINESVLFAFAPESASATEAELDHARGSLSGRNRELLDTVGNAVKE
ELLRIKDALDLHLRTGGEPGQLQTQVNELGAVADTLGMMGLGVARGVVVQQRDALTSVVQ
GEQQIDEGMLLDIAGALLYVDASLDDQVAHLGASGSGEEDPSAVEGRRTLEVLAHEAIAN
FAAAREHFVAFIETNWNHQQLDEVPRLLGEVAGALRMLDLPLPADYLQGVRQYIAVELIG
RQRVPSGRQLDTLADAMASLEYYLEALRERRPGREDILDITRTSLETLRYWPLPAEQQAV
VEAEAPVLAVTPEPIAPIAPVALEPVPIEVTPAAPAPGEVAPAPLPDFTFDPAPAAVTPD
VAEPAVVAPVAEAPTARVLPPLVFEASTAPVAADAPKWTLAHEDRSEAAAAETPHDEVAP
TFASFDPVQAEGEDTTGRWDGTALDIAPISLDGFDAEAGIEADLDAVAPSPITAGSAFDP
VAAESDSLELHDEPIEFTVDDALHNAGDVLSLNVDDTIEPGTTVDVEALPAFLQGDAALE
DVPAAAEPVAASSSAPVANVQEAVIGKIELDDESARFLAELDAAAAQFSTAPAAAEPTEA
APTELAVDAVESIEAGFEDDGENIDQDIRDVFIEEFDEELVNLGNLLPVWRAAPDNMDRL
RPIRRVFHTLKGSGRLVGARTLGEFSWKIEGMLNRVLDGTRPASPAVVAMVTQAYEVLPQ
LNAALRDGSRVHADLQAMQGIADRVAAGEETFHVPLQRPAAAPVAPVEAAAASEPVVDPV
VEAAFAEEAVVEDVLTGTPANIDDVLREILEAEVETHHGTLQTWLQQAKVSPQPVTDALL
RAVHTMNGAFAMTDVPEITAVTGAAESFIKRSLAADALPDAEGVAALDAAAAAIRTTMEA
LQAPTPRIPAQAELAARLQALAETLPEARWPALVADELDAGDQDDDADDAIAAELTSVVS
LRDAQDATAQELAALAAQFDVQGGLATLDDTSAPELQQAIVESDALSVVEFDAVPAQDAA
AAEDSLAVQELTGSDDLSAYFDADLPVGLDVVEVEATAVADISAEEPVAPVSEAGLESVE
LTGAEDLSQYFDPGMVTESVEDATDALDEVLPPVPAFGEPVDLQQALDDGLTVIDGETSE
AADGLLALDATLAGQNDSDAFAGVEAGAQNDAAPLFELEEAPLVATVVSDPDHDDVLEDQ
ANVEPLDFSQLDRELVDIFVEEGKDLLDHCDGLISELRDAPEDREVVAGLQRDLHTLKGG
ARMAGINAIGDLGHSIESLLEVVAANRTDIDRADVKLLERGFDRLHQMLTRTGNHQAVAM
PVDLINAFEQRTLGRVEGVEAEIESVDTAPVQIDAAPVEDVVPETAAIETSVEAPAIEVP
AVEATVEAPAAQDPAPVEDVPAAVAVVDAQAPVQAPVETVAAAPVAPIVVERRAPLAELA
PLSAPVQLEAAADDDMLARPQQEQVRVRADLLDRLVNHAGEVAIYRSRLEQQLGAFRGAM
AELDRTNARLRDQLRRLDLETEAQIVARYQREQEQVDHKFDPLELDRFSTLQQLSRALNE
SAADLGGLQGVLDDLSRQYDVLLQQQSRVSSELQDGLMRARMVPFDGLVPRLRRVVRQAG
QDTGKQVHVTLDGTHGELDRNVLDRMVAPLEHMLRNSVAHGLETPAQRRAAGKPEEGEIA
IRLRREGSEIVLEVADDGAGLDRDAIRRRAEQRGLIEAGAQISEAELDAMIFAAGFSTAD
QVSQLAGRGVGMDVVHNEVRQLGGSVDIHSVRGKGVTFTLRLPQTLAVTQAVFVQIGETT
FAVPVASVSGIGRISRERFESANGGYHYGGEEFALHDLGTLVGQGQAKAEGQDQVPLLLV
RAGELRAAVAIDQVLGNREVVVKPVGLQIASVPGIYGATITGDGRVVVILDVAPLVRRHQ
ANPIKPVDTTAQASDRQVPLVMVVDDSLTMRKVTGRILERHNFEVAVARDGIEALERLEE
RVPDLMLLDIEMPRMDGYELATTMRADPRYKDVPIVMITSRSGDKHRQRAFEIGVQRYLG
KPYQELDLMRNVYDLLGIARVRE
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctgcgcgatgccatgagccacgccgctctgggctgggtcaagccggagctg
gacgagaccctgcgccaggtgcgcaacgaggtcgagtacttcgtggaagatccggcggac
ggaagccgcatgcgcttctgcgccggttacctgcaccaggtgcagggcaccctgcgcatg
gtggagctgtatgcaccggccatggtcgccgaggaaatggagcagctggccaacgccgtc
ggtgcgggccaggtgccggaccgtgacgaagcctgtgccaccctgatgcgcggcagcgtg
ctgctgcccgattatctggagcgcctgcagaacggtcaccgcgatattccgatcgtgctg
ctgccgctgctcaacgagatccgcgccgcgcgaggcgcgccgggtatcaatgaaagcgtg
ctgttcgccttcgctccggaaagcgccagtgccactgaagccgagctcgaccacgcgcgc
ggcagcctgagcgggcgcaaccgtgagctgcttgataccgtcggcaacgcggtcaaggaa
gaactgctgcgcatcaaggatgcgctggacctgcatctgcgcaccggcggcgagccgggc
cagctgcagacccaggtcaatgaactgggcgccgtggctgacaccctgggcatgatgggc
ctgggcgtggcccgtggcgtggtcgtgcagcagcgcgatgcgctgaccagcgtggtccag
ggcgaacagcagattgacgaaggcatgctgctggatatcgccggcgcgctgctgtacgtg
gacgcttcgctggacgaccaggtcgcgcacctgggggctagcggcagcggcgaagaagat
ccgagcgcagtggaaggccgccgcacgctggaagtgctggcgcatgaggcgatcgcaaat
ttcgcggctgcccgtgagcatttcgtcgctttcattgaaaccaactggaaccaccagcaa
ctggacgaagtgccgcgcctgctcggcgaagtcgccggcgcgctgcgcatgctggatctt
ccgctgccggccgactacctgcagggtgtacgtcagtacatcgcggtggagctgatcggc
cgccagcgcgtgcccagcggtcgtcagctggatacgctggccgacgccatggccagcctg
gagtactacctcgaggcattgcgcgagcgtcgcccgggtcgcgaagacattctggacatc
acccgcaccagcctggaaacgctccgctactggccgctgccggctgagcagcaggccgtc
gtcgaggcggaagcgccggtgctggcggttacgccggagccgattgcgcccatcgccccg
gtcgcgctcgagccggtgccgatcgaggtcaccccggccgcacctgcgcccggcgaggtt
gcgccggcaccgcttccggacttcacctttgaccccgcacctgctgcggttacgccggac
gtggctgagccagccgtggtggccccggtcgccgaagcacccactgcacgcgttctgccg
ccgctggtgtttgaagcctctaccgctccggtggcagccgacgcgccgaagtggacgctc
gcgcatgaagatcgcagcgaagcggcggccgctgaaacgccgcacgatgaagtggctccc
acctttgccagcttcgatccggtgcaggccgagggcgaagacaccaccggtcgctgggac
ggcactgcgctggacatcgcgccgatctcgctggacggcttcgatgccgaagcgggcatt
gaagcggacctcgacgctgtggccccgtcgcccatcaccgccggttcggcatttgatccg
gtggctgcggaaagcgactcgctggagctgcacgacgaacccattgaattcaccgtcgat
gacgcgcttcacaatgccggcgacgtgctgtcgctgaatgtggacgacaccatcgagccg
ggtacgaccgtcgacgtggaagcgttgcctgcgttcctgcagggcgatgcggcacttgag
gacgtgccggccgccgccgagccggtggccgcgtcctcgtcggcaccggtcgccaatgtg
caggaagccgtgatcggcaagatcgagctggacgatgaatcggcccggttcctggccgag
ctggacgccgctgcggcgcagttcagcacggccccggcagcggcggagccgaccgaggca
gcacccaccgaacttgccgtcgacgcggtcgagagcatcgaagcgggtttcgaggacgac
ggcgaaaacatcgaccaggacatccgcgacgtcttcatcgaagagttcgacgaggaactg
gtcaacctgggcaacctgttgccggtctggcgcgccgcgcccgacaacatggaccgtctg
cgtccgatccgtcgcgtcttccacaccctgaagggcagtgggcgactggtcggtgcgcgt
acgcttggcgagttcagctggaagatcgagggcatgctcaaccgcgtgctcgatggcacc
cgcccggcgtcgccggccgtggtcgccatggtcacccaggcttatgaagtgctgccgcag
ctgaatgccgcgctgcgcgatggcagccgcgtgcacgccgatctgcaggccatgcaggga
atcgccgatcgtgttgctgcgggcgaggaaaccttccatgtgccgctgcagcgtccggca
gccgcccccgttgcgccggtcgaagcggcggcagcgagcgaaccggtcgtcgacccggta
gtcgaagcggctttcgccgaagaagctgtcgtcgaagacgtgttgaccggcaccccggcc
aacatcgacgacgtgctgcgcgagatcctcgaagccgaagtcgaaacccatcacggtacc
ttgcagacctggttgcagcaggccaaggtcagcccgcagccggtcaccgatgcgctgctg
cgcgccgtgcacaccatgaacggtgcgttcgcgatgaccgacgtgccggagatcaccgcg
gtcaccggtgccgccgaaagcttcatcaagcgttcgctggctgccgacgcactgcccgat
gccgaaggcgttgccgcgcttgatgccgctgccgcggccatccgcaccaccatggaagca
ctgcaggctccgactccgcgcattcccgcgcaggccgaacttgccgcgcgactgcaggca
ctggcggaaaccctgcccgaagcacgctggccggcgctggtcgccgacgagcttgacgca
ggcgatcaggacgacgacgccgacgacgcgatcgcggccgagctgacgtccgtagtcagc
ctgcgcgacgcgcaggatgccaccgcgcaggagctggcggcgctggccgcgcagttcgac
gtgcagggcggtctggccacgttggacgacaccagcgcgccggaactgcagcaggccatc
gtcgaaagcgacgcgctgagcgtggtcgagttcgacgccgtgccggcccaggacgccgcg
gcagctgaagacagcttggcggtgcaggagctgaccggcagcgatgacctgtcggcctac
ttcgatgccgacctgccggtgggcctcgacgtggtcgaggtggaagcgacggccgttgca
gacatcagcgctgaggaaccggttgccccggtctccgaagccggtctggaatcggtggaa
ctcaccggtgccgaagatctgtcgcagtacttcgacccgggtatggtcaccgaatcggtg
gaggacgcgaccgacgcactcgacgaggtgctgccgccggtccccgcgttcggcgagccg
gtcgatctgcagcaggcgctggacgatggcctgaccgtgatcgacggcgagaccagcgag
gcggccgacggcctgcttgcgctggacgccacgctggcgggccagaacgacagcgacgcc
ttcgccggtgttgaagccggtgcgcagaacgacgccgcaccgctgtttgaactggaagag
gcaccgctggtggcaacggtcgtcagcgatccagatcacgacgatgtcctggaagaccag
gccaacgtcgagccgctcgacttcagccagctcgaccgcgagctggtcgacatcttcgtc
gaagaaggcaaggacctgctggaccactgcgacggcctgatcagcgagctgcgcgatgcg
cccgaggaccgcgaagtggtggccgggctgcagcgtgacctgcacaccctgaagggtggt
gcacgcatggccggcatcaacgccatcggcgacctgggccacagcatcgagtcgctgctg
gaagtcgtcgcagccaaccgtaccgacattgatcgcgccgacgtcaaactgctggagcgt
ggtttcgatcgcctgcaccagatgctgacccgcaccggcaaccaccaggcggtcgccatg
ccggtcgacctgatcaacgccttcgaacagcgcaccctggggcgtgtcgagggcgtcgaa
gccgagatcgagagcgtggacaccgcgccggtgcagattgatgcagccccggtcgaggac
gtcgtgccggaaactgcagcgattgagacgagcgtggaagcgccggctatcgaagtgcct
gctgtcgaggcaactgtcgaagcgcctgccgcgcaggatccggcaccggtcgaagacgtg
ccggctgcagttgcagtggtcgacgcgcaggcaccggtgcaggcaccggtcgaaaccgtt
gccgcggctccggttgcccccatcgtggtcgaacgccgcgcgccgctggccgagctggct
ccgctgtcggctccggtgcagcttgaagcggccgccgatgacgacatgctggcccgtccg
cagcaggaacaggtgcgcgtgcgcgccgacctgctggaccgcttggtcaaccatgccggt
gaagtggcgatctaccgctcgcgtctggaacagcagctgggtgccttccgcggcgccatg
gccgaactggaccgcaccaacgcccgtctgcgtgatcagctgcgccgtctggacctggaa
accgaagcgcagatcgtcgcccgttaccagcgcgagcaggaacaggtggatcacaagttc
gatccgctggaactggaccgcttctccacgctgcagcagctcagccgtgcgctgaacgaa
tcggcggccgaccttggcggtctgcagggcgtgctggacgacctgtcgcgccagtacgac
gtgctgctgcagcagcagtcgcgcgtcagctcggaactgcaggatggcctgatgcgtgcg
cgcatggtgccgttcgatggcctggtgccgcgcctgcgtcgcgtggtccgtcaggccggc
caggacaccggcaagcaggtgcacgtcaccctcgacggtacccacggcgaactcgaccgc
aacgtgctcgaccgcatggtcgcgccgctggaacacatgctgcgcaactcggtcgcgcat
ggtctggaaacgccagcgcagcgtcgcgctgccggcaagccggaagagggcgagatcgcc
atccgtctgcgccgcgaaggctcggaaatcgtgctggaagtggccgacgatggtgccggc
ctggaccgcgacgcgatccgccgccgcgccgaacagcgtggcctgatcgaggccggcgcg
cagatcagcgaagccgaactggacgctatgatcttcgctgccgggttcagcaccgccgat
caggtcagccagctggcgggccgtggcgtgggcatggacgtggtgcacaacgaagtacgc
cagctcggcggctcggtggacatccactcggtgcgtggcaagggcgtcaccttcactctg
cgcctgccgcagaccctggcggtcacccaggccgtgttcgtgcagatcggcgaaactacc
ttcgcggtgccggtcgcctcggtcagtggtatcggccggatctcgcgcgagcgcttcgaa
tcggccaacggtggctaccactacggcggcgaagagtttgccctgcatgacctgggcacg
ctggtcggccagggccaggccaaggccgaaggccaggatcaggtgccgttgctgctggtg
cgcgccggtgaactgcgtgctgccgtggccatcgaccaggtgctgggcaaccgcgaagtc
gtggtcaagccggtcggcctgcagatcgcctcggtaccgggtatctacggtgccaccatt
accggcgatggccgcgtcgtggtcatcctggacgttgcaccgctggtgcgtcgtcaccag
gccaacccgatcaagccggtcgacaccaccgcccaggccagcgaccgccaggtcccgctg
gtgatggtggtcgacgactcgctgaccatgcgcaaggtgaccggccgcatcctcgagcgt
cacaacttcgaagtggcggttgcccgcgacggtatcgaagcgctggaacgcctggaagaa
cgcgtgccggacctgatgttgctggatatcgaaatgccgcgcatggacggctatgaactg
gccaccaccatgcgtgcagatccgcgctacaaggatgtgccgatcgtgatgattacctcg
cgcagcggcgacaaacaccgtcaacgcgcctttgaaatcggtgtccagcgctacctgggc
aagccgtaccaggagctggacctgatgcgtaacgtgtatgacctgctggggatcgcccgt
gtccgagaatga
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integrated database retrieval system
