Stenotrophomonas oahuensis: PDM29_02560
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Entry
PDM29_02560 CDS
T10110
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_02560
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_02560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WNH53174
UniProt:
A0ABY9YSL8
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Position
578709..581096
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AA seq
795 aa
AA seq
DB search
MNRKTTLAAAVAVVLGASALSASAQTAPAASPSTLDTVIVTGTRVADRTVAESQSPIDII
TPEALQSTGTTELATALARALPSLNFPRPALTDGTSGIRPAQLRGLSPDQVLVLVNGKRR
HTSAQINVNGSIGRGSSAVDINAIPIAAIERVEVLRDGASAQYGSDAIAGVINIVLKGAD
SGGSLALDAGQYSAGDGNRYQLSGDAGVGFADGRGKLHVAGQILQQDESNRAGPYQGTTP
NTGNFPDIGQTTFVVGDPQVDATAASANASFQFSDRLSAYATVLASNRDITSFAFYRSRN
NSGQGALLAQTYPDGFVPQINQYSKDRSVVAGLKGSTESGWTWDVSYNHGENTIDFHTRN
TINYALGVNSPRSFYAGELKYAQDIGNVDITKTLDWGLAYPVTLSFGGEYRRETWEQGAG
EPNSYTGTGAQGFGGFTPLNAVDADRHNYAVYAGLEADFTDKFSAGATGRYEDYSDFGDK
FSGKLSARYAFTDKVALRATASSGFRAPSLAQQSYQAVTSTIVNGAFVERGTFPTTSAAA
QALGASPLKAESSTSYSLGLVLQPVDRLYLTVDAYQIDIDDRIILSTNITTNAATNSLLA
GLGLPGVTAFSYFTNGVDTRTRGVDAVASYTVPFSASSLELTAAYSYNETEVKKYIASPA
VFGTLGLTQSLIGRDEVGRIEDSYPRDKTILSGTWRSDHWDLSLAATRYGEFTVRNSATP
TRDQTYGDSWVLDASVSYKPSANWALTLGADNILDEYPDRTVDLQNSTWGMLPYSNYSPY
GFNGAYVYGRITYKW
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaagaccacgctcgccgccgccgttgccgtcgtgctcggcgcttccgccctc
tccgccagcgcccagaccgcgccggccgcctcccccagcaccctggacacggtgatcgtc
accggtacccgcgtcgccgaccgtacggtggccgagtcgcagtcgccgatcgacatcatc
acccccgaggcccttcagtccacgggtaccaccgaactggccaccgccctcgcccgtgcc
ctgccctcgctgaatttcccgcgcccggccctgaccgacggcaccagcggcatccgcccg
gcgcagctgcgcgggctgtccccggaccaggtgctggtgctggtcaacggcaagcgccgc
cacacctcggcgcagatcaacgtcaacggcagcatcggccgcggctcgtcggcggtggac
atcaatgcgattccgattgccgccatcgagcgggtcgaagtgctgcgtgacggcgcgtcc
gcccagtacggctcggatgcgatcgccggggtgatcaacatcgtgctgaagggtgcggac
agcggcggcagcctggcgctggacgccggccagtactcggccggcgacggcaaccgctac
cagctgtccggcgacgctggggtcggctttgccgatggccgcggcaagctgcatgtggcc
ggacagatcctgcagcaggacgaaagcaaccgcgccgggccttaccagggcaccacgccg
aacacgggcaacttcccggacatcggccagaccaccttcgtggtcggcgacccgcaggtg
gacgccacggcagcgtcggccaatgccagcttccagttcagcgaccgcctgtcggcctac
gcgacggtgctggccagcaaccgcgacatcacctcgttcgcgttctaccgttcgcgcaac
aacagcgggcaaggcgcgctgctggcgcagacctatcctgacggcttcgtgccgcagatc
aaccagtactccaaggaccgttcggtggtggccgggctgaagggcagcaccgaaagcggc
tggacctgggatgtgagctacaaccatggtgagaacaccatcgatttccacacccgcaac
acgatcaactatgcgctgggcgtgaacagcccgcgttcgttctatgcgggcgagctgaag
tacgcgcaggacatcggcaatgtggacatcaccaagaccctggactggggtctggcctac
ccggtgacgttgtcgttcggcggcgagtaccgccgcgagacctgggaacagggcgcgggc
gaaccgaactcgtacaccggcacgggtgcgcagggcttcggcggtttcacgccgctcaac
gcggtggatgcggatcgccacaactacgcggtgtatgcggggctggaagcggacttcacc
gacaagttctcggccggtgcaacgggtcgttacgaggattactcggacttcggcgacaag
ttctcgggcaagctgtcggcgcgctatgcattcaccgacaaggtggcgctgcgcgcgacg
gcctcgagcggcttccgtgcgccgtcgctggcgcagcagagctaccaggcggtgaccagc
acgatcgtcaacggggcgttcgtggaacgcggcaccttcccgaccaccagcgcggcggcg
caggcactgggggcgagcccgctgaaggcggaaagttcgacgtcgtacagcctgggcctg
gtgctgcagccggtggaccggctgtacctgacggtggatgcgtaccagatcgacatcgac
gaccgcatcattctgtcgacgaacatcaccaccaacgcggcgaccaacagtctgctggcg
ggtctggggctgccgggggtgacggcgttctcgtacttcaccaacggggtggacacgcgc
acgcgcggcgtggatgcggtggcaagctacacggtgccattcagcgcgagctcgctggag
ctgacggcggcatacagctacaacgagaccgaggtgaagaagtacatcgcttcgccggcg
gtgttcggcacgctggggctgacccagtcgctgatcggacgtgacgaggtgggccgcatt
gaagacagctacccgcgcgacaagacgattctgagcggcacgtggcgctcggaccactgg
gacctgagtctggcggcgacgcgctatggtgagttcacggtacgcaactcggccacgccg
acgcgcgaccagacctacggcgactcgtgggtgctggatgcatcggtgagctacaagccg
agcgcgaactgggcgttgaccctgggtgcggacaacatcctggacgaatacccggaccgc
acggtggacctgcagaactccacctggggcatgctgccgtacagcaactactcgccgtac
ggtttcaacggtgcctacgtatacgggcgcatcacctacaagtggtga
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