Stenotrophomonas oahuensis: PDM29_02705
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Entry
PDM29_02705 CDS
T10110
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
sou Stenotrophomonas oahuensis
Pathway
sou02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDM29_02705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sou02022
]
PDM29_02705
02035 Bacterial motility proteins [BR:
sou02035
]
PDM29_02705
Two-component system [BR:
sou02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
PDM29_02705
Bacterial motility proteins [BR:
sou02035
]
Pilus system
Twitching motility proteins
PDM29_02705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_16
AAA_5
Mg_chelatase
HTH_50
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WNH53203
UniProt:
A0ABY9YQK0
LinkDB
All DBs
Position
620061..621452
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AA seq
463 aa
AA seq
DB search
MNENRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVTEIAQHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHAL
ELNNSERPAPPPLTSEQTTRLLGDSAAMDALRTTIEKVARSQAPVYILGESGVGKELVAR
TIHAQSARAAGTFVPVNCGAIPSELMESEFFGHKKGSFSGAHADKPGLFQAAHGGTLFLD
EVAELPLQMQVKLLRAIQEKSIRPVGAATEVPVDVRILSATHKDLGQLVEESRFRHDLYY
RINVIELRVPPLRERSSDLPQLAASILARLARTHGRPTPLLAPSALDAMGLYHFPGNVRE
LENILERALALAEGDTISASDLRLPQPGATRQTGVNTAATVQEEAVVDLPAGNGALPSYI
EQMERTAIQKALEENRWNKTRTAAQLGITFRALRYKLKKLGMD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaccgcagcgccctcgttgtcgacgacgaacgcgacattcgcgaactgctg
gtactgaccctgggccgcatgggcctgcggatcagcacggcggccaatctcgccgaggcc
cgtgagctgctggccagcaacccgtacgacctgtgcatcaccgacatgcggctgcccgac
ggcaacggcatcgagctggtgaccgagattgcccagcactacccgcgcaccccggtggcg
atgatcaccgccttcggcagcatggacctggcggtggaagcgttgaaggccggtgccttc
gacttcgtcagcaagccggtggatatttcagtgctgcgcgggctggtgaagcacgcgctg
gagttgaacaacagcgagcgccccgcgccgccgccgctgaccagcgagcagaccacccgc
ctgctgggcgactcggccgcgatggacgcgctgcgcaccaccattgaaaaggtcgcccgc
agccaggcccccgtgtacatcctgggcgaatccggcgtgggcaaggaactggtggcccgc
accatccacgcgcagagcgcgcgtgccgccggcaccttcgtgccggtgaactgcggtgcc
attccctccgagctgatggaaagcgagtttttcggccacaagaagggcagcttcagcggc
gcgcacgccgacaagcccggcctgttccaggccgcgcacggcggcaccctgttcctggac
gaagtggccgagctgcccctgcagatgcaggtgaagctgctgcgcgccatccaggaaaag
tcgatccgcccggtgggcgcggccaccgaggttccggtggacgtgcgcattctgtcggcc
acccataaagacctgggccagctggtggaagaaagccgcttccgccatgacctgtattac
cgcatcaacgtgattgaactgcgcgtgccgccgctgcgcgaacgcagcagcgacctgccg
cagctggccgcctccatcctggcaaggctggcccgcacgcacggccgccccaccccgctg
ctggccccttcggcgctggacgccatggggctgtaccacttccccggcaacgtgcgcgaa
ctggaaaacattctggagcgcgccctggctcttgccgaaggcgacaccatcagcgccagc
gacctgcgcttaccccagcccggtgcgacgcgccaaaccggtgtgaacacggcggccacg
gtgcaggaagaagccgtggtggacttacccgccggcaacggtgccctgccctcgtacatc
gagcagatggagcgcaccgcgatccagaaggcgctggaagagaatcgctggaacaagacg
cgcaccgccgcgcagctgggcattacgttccgtgcgctgcgttacaagttgaaaaagctg
ggaatggattga
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