Stenotrophomonas oahuensis: PDM29_03430
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Entry
PDM29_03430 CDS
T10110
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_03430
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_03430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WNH53342
UniProt:
A0ABY9YR11
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All DBs
Position
complement(778702..781578)
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AA seq
958 aa
AA seq
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MNFRTPAVRLGLLPAGIALALAPSFASAQEAAAGTTDLDRISVTGSRIRGANMETQQPIL
TMTRESLEKQGFSSVADVLNNLTSAGSPAISRSDSLSSGENVGGYYVDLRNLGAQRTLVL
MNGKRLGATTAGYQDLGQIPMSAIERIEVLKDGASSIYGSDAIAGVVNVITRKNIDGGEV
NVYFGQYDQGDGENQQYSMTLGATGERGSLTLSAEYSKQDPVWAKDRWFSRDGGKGPNST
TADWSAVSQNSTWCDPRVWGDCKARPQGQAQPEWKTLNEGGNPNNPADYHLLTPAEYANS
NEQMSVLTGTERKSLYVNGTYDFTDTISLNTDVLYNERNTDQQIAGYPFQSSSFSTPLSA
DSAFNPTAVNGVGGSDVQFRRRLWEVPRTTESQLKTLRFAPTVSGYFEFAGKTFDWDVGA
LWNRNESIKSNHGDMSLIAAEQALGASFINANGVAQCGTAANPVALGDCRPWNPLLPYGV
AGAGSLADQDLQDFLFPVYTTRGVTKTTSFTANLAGSIVTLPAGDLGFAVGVEHRKEEGS
YVPDAFAQSGMSTGLGQKPTRGEYDLNEVYLELNVPILADMAFAKELTLNVASRYSDYSN
FGGTTNSKFGLTWRPMDELLVRGTYAEGFRAPTIADLYGGLSSSFESYIDPCGITAPGSV
AGNAACINGGAPANYTQLGQAGAVCGTLPCQSGDQFISGANPDLSPETSKSTTFGLVWSP
RWVQGLDVSLDWYRYEISDMIIDDSVDRILRDCYVLGNTDRCSSVTRAADGHISAITYGT
ANLGKMETEGYDLGIKYRLPELAIGQFNIDWQTSYLSKYDEQNQNSAGDNIMMGMVGQDA
LFRVRSNFNVNWALGDFSVNYTARYYSGLNEDCISIGCTDPDRYAYGEKAPLRKTGANTF
HDLQVSYKAPWDATIALGANNVFDHKGPLMYSQQNSSFAYYGGFDIGRFLYMKYTQRF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccgtactcccgcagtgcgcctcggcctgctgccggccggcattgccctggcg
ctcgcgccgagctttgcctcggcgcaggaagctgcagcgggcaccactgacctggatcgc
atctcggtcaccggctcgcgtattcgcggtgccaacatggagacccagcagccgatcctg
acgatgacccgtgaatccctggaaaagcagggcttctcgagcgtcgccgacgtgctgaac
aacctgacctcggccggctcgccggccatctcgcgttcggactcgctgtcctcgggcgaa
aacgtgggcggctactacgtcgacctgcgcaacctgggcgcacagcgcaccctggtcctg
atgaacggcaagcgcctgggcgccaccactgccggttaccaggatctgggccagatcccg
atgtcggccatcgagcgcattgaagtcctgaaggacggcgcttcctcgatctacggttcc
gacgccattgccggcgtggtcaacgtgatcacccgcaagaacatcgacggcggcgaagtc
aacgtctacttcggtcagtacgaccagggcgacggcgaaaaccagcagtactcgatgacc
ctgggtgctaccggcgaacgcggcagcctgaccctgtcggccgaatactccaagcaggat
ccggtgtgggcgaaggatcgttggttcagccgtgacggcggcaagggtccgaattcgacc
actgctgactggagcgctgtcagccagaacagcacctggtgcgacccgcgcgtgtggggc
gactgcaaggcgcgtccgcagggccaggcccagccggagtggaagaccctcaatgaaggt
ggcaacccgaacaacccggccgattaccacctgctgaccccggccgagtacgccaactcg
aacgagcagatgagcgtgctgaccggtaccgagcgcaagtcgctgtacgtcaacggcacc
tacgacttcaccgacaccatcagcctgaacaccgacgtgctctacaacgagcgcaacacg
gatcagcagattgccggttacccgttccagtcctcgtcgttcagcaccccgctgtcggct
gacagcgccttcaacccgaccgccgtcaatggcgtgggtggcagcgacgtgcagttccgt
cgtcgtctgtgggaagtgccgcgcaccaccgaaagccagctgaagaccctgcgctttgcg
ccgaccgtcagcggctacttcgagttcgctggcaagaccttcgattgggacgtcggcgcg
ctgtggaaccgcaacgagtcgatcaagtccaatcacggcgacatgagcctgatcgccgcc
gagcaggcgctgggcgcatcgttcatcaacgccaacggcgtggcacagtgcggtaccgct
gccaacccggtcgcgctgggtgactgccgtccgtggaacccgctgctgccgtacggcgtt
gccggtgccggttcgctggctgaccaggacctgcaggacttcctgttcccggtctacacc
acccgcggcgtgaccaagaccaccagcttcaccgccaacctggccggttccatcgtgacc
ctgccggccggcgacctcggcttcgccgtgggcgtggagcaccgcaaggaagaaggcagc
tacgtgccggacgccttcgcacagtcgggcatgtccaccggcctgggccagaagccgacc
cgtggtgagtacgatctgaacgaggtctacctcgaactgaacgtgccgatcctggccgac
atggcgttcgccaaggaactgaccctgaacgttgccagccgttattcggactacagcaac
ttcggtggcaccaccaacagcaagttcggtctgacctggcgtccgatggacgagctgctg
gtccgcggcacctatgccgagggcttccgcgctccgaccatcgctgacctgtacggtggc
ctgagctcgagcttcgagtcctacatcgatccgtgcggcatcaccgctccgggcagcgtg
gcaggcaatgccgcctgcatcaacggcggcgcgccggccaactacacccagctgggtcag
gccggtgccgtctgcggcaccctgccgtgccagtcgggcgaccagttcatctcgggtgcg
aacccggacctgtcgccggaaacctccaagagcacgaccttcggtctggtctggagcccg
cgctgggtgcagggtctggacgtctcgctggactggtaccgctacgaaatcagcgacatg
atcatcgacgactccgtcgatcgcatcctgcgtgattgctacgtgctgggtaacaccgac
cgttgcagcagcgtgacccgtgccgccgacggccacatcagcgccatcacctacggcacc
gccaacctcggcaagatggaaaccgaaggttacgacctgggcatcaagtaccgtctgccg
gagctggccatcggtcagttcaacatcgactggcagaccagctacctgtccaagtacgac
gagcagaaccagaactctgccggcgacaacatcatgatgggcatggtcggtcaggatgcg
ctgttccgcgtgcgttcgaacttcaacgtcaactgggcactgggtgacttctcggtcaac
tacaccgcccgttactactcgggtctgaacgaagactgcatctcgatcggctgcaccgat
ccggatcgctacgcgtacggtgagaaggctccgctccgcaagaccggtgccaacaccttc
cacgacctgcaggtcagctacaaggctccgtgggatgccaccatcgccctgggcgcgaac
aacgtgttcgaccacaagggtccgctgatgtactcgcagcagaactcgagcttcgcctac
tacggcggtttcgatatcggccgcttcctgtacatgaagtacacccagcgcttctga
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