Stenotrophomonas oahuensis: PDM29_03505
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Entry
PDM29_03505 CDS
T10110
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
sou Stenotrophomonas oahuensis
Module
sou_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_03505
01504 Antimicrobial resistance genes [BR:
sou01504
]
PDM29_03505
Transporters [BR:
sou02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PDM29_03505
Antimicrobial resistance genes [BR:
sou01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PDM29_03505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF5693
Motif
Other DBs
NCBI-ProteinID:
WNH53355
UniProt:
A0ABY9YS03
LinkDB
All DBs
Position
complement(800832..803990)
Genome browser
AA seq
1052 aa
AA seq
DB search
MRRFNLSEWALGNRPLVLFAMLAFAIIGAWSYKHLGQSEDPPFTFKVMVVRTQWPGATAE
QVSRQVTEPIEKALLNTGQYEFIRSYSRPGESQVIFAAKDSLRSKAIPDLWYQVRKRVGD
IKPTLPREIVGPFFNDEFGDTFGNIYALTGEGFDYAVMRDYADRIQLELQRVPDVGKIEL
EGLQDEKIWIELSNTKLATLGVSLQQVQQSLADQNVMAATSFFETPTDRVQLRVTGQFQS
VDDIRRFPIQAGERTIHLGDIAEVKRGFADPASPKMRFMGEDAIGIAVAMKDGGDILKLG
STLDAEFKRLQKTLPVGMQLRKVSDQPHAVEESVGEFVQVLTEAVVIVLLVSFFSLGLRT
GLVVGVTIPLVLAMTFFVMHYFDIGLHKISLGALVLALGLLVDDAIIAVEMMATKMEQGY
DRLRAASFAWESTAFPMLTGTLITAAGFLPIATAASSTGEYTRSLFQVVTIALVVSWIAA
VLFIPYLGDKMLPDLFNPQPPRPDSLAGRWLARRQAWADRHPALGRFIVPKQHGHDHDPY
QRPFYTRFRRFLDMCLRHRWWVIAATAALFVFSLLIFRFVPQQFFPDSTRPELMVDIELA
EGASLQATQAQASKLEKLLKGREGIQNYVAYVGTGSPRFYLPLDQQLPATNFSQFVVLTE
NAEAREATRDWLLKEVIPQFPDVQMRVTRLENGPPVGYPVQLRVSGEHIAQVQAIARKVE
AKVRENPHVMNVNLDWSEPSKVVRLVIDQDRARALGVTSAQVSQLLGTSLSGTSVSTYRE
GNRLIEMLLRGPDNERIRLDMLGSLAIPTQSGTSVTLSQVARLEYVFEDGIIWHRNRLPT
VTVRADIGDGSQALDVVQQILPTLDGIRAELPHGYLLETGGTVEDSARGQDSIKAGMPLF
LIVVATLLMLQLRSFSRAAMVLVTAPLGIIGATLFLLLFRAPFGFVALLGTIALAGMIMR
NSVILIDQIQQDIDAGHDRWHAIIDATVRRFRPIVLTALAAVLAMIPLSRSAFYGSMAIS
IMGGLIVGTVLTLVFLPALYAAWFRVKPSEAE
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccgcttcaatctttccgaatgggcgctgggcaaccggccactggtgctgttcgcg
atgctcgccttcgccatcatcggtgcgtggtcgtacaagcacctggggcagtccgaggac
ccgccgttcaccttcaaggtgatggtggtgcgcacgcagtggcccggtgccaccgccgaa
caggtctcgcgccaggtgaccgagccgatcgagaaggccctgctcaacaccgggcagtac
gagttcatccgctcgtactctcgccccggcgagtcgcaggtgatcttcgcggccaaggac
agcctgcgctccaaggccattccggacctgtggtaccaggtacgcaagcgggtgggcgac
atcaagccgaccctgccgcgtgagattgtcgggccgttcttcaacgacgaatttggcgac
accttcggcaacatctacgcactgaccggcgaaggcttcgattacgcggtgatgcgcgac
tacgccgaccgcatccagctggagctgcagcgggtgcccgatgtgggcaagatcgagctg
gaaggtctgcaggacgaaaagatctggatcgaactgtccaacaccaagttggccacgctg
ggtgtttccctgcagcaggtgcagcagtcgctggccgaccagaacgtgatggcggcgacc
agcttctttgaaacccccaccgaccgcgtgcagctgcgcgtgaccggtcagttccagagc
gtggacgacatccgtcgtttcccgatccaggccggcgaacgcacgatccacctgggcgat
atcgccgaggtgaagcgtggctttgccgacccggcgtcgccgaagatgcgcttcatgggc
gaggacgccatcggcatcgcggtggcgatgaaggacggcggcgacatcctcaagcttggg
tccacgctggatgccgagttcaaacgcctgcagaagaccctgccggtgggcatgcagctg
cgcaaggtctccgaccagccgcatgcggtggaagaatcggtgggcgagttcgtgcaggtg
ctcaccgaggccgtggtgatcgtgctgctggtcagctttttctcgctgggcctgcgtacg
ggcctggtggtgggcgtgaccattccgctggtgctggcgatgaccttcttcgtcatgcat
tacttcgacatcggcctgcacaagatatcgctcggcgcgctggtgctggcgctgggcctg
ctggtggacgatgcgatcatcgcggtggagatgatggccaccaagatggagcagggctac
gaccgcctgcgcgccgccagcttcgcctgggaatcgaccgcgttcccgatgttgaccggc
acgttgatcaccgccgccggcttcctgccgattgccaccgcggcgtcgagcacgggcgaa
tacacccgttcgctgttccaggtggtgaccatcgcgctggtggtgtcgtggattgccgcc
gtgctgttcattccgtacctcggcgacaagatgctgccggacctgttcaacccgcaaccg
ccgaggcccgacagcctggccgggcgctggctggcgcgccgtcaggcgtgggcggaccgt
cacccggcgctgggccgcttcatcgtgcccaagcagcacgggcacgaccacgatccgtac
cagcggccgttctacacgcgcttccgccggttcctggacatgtgcctgcgtcatcgctgg
tgggtgattgcggcgaccgccgcgctgttcgtgttctcgctgttgatcttccgcttcgtg
ccgcagcagttcttcccggattcgacccggccggaactgatggtggacatcgaactggcc
gagggcgcatcgctgcaggcgacccaggcacaggcgagcaagctggagaagctgctgaaa
ggccgcgagggcatccagaactatgtggcctacgtgggcaccggctccccgcgcttctac
ctgccgctggaccagcaactgccggcgaccaacttctcgcagttcgtggtgctgacggag
aacgcggaagcacgtgaagcaacccgcgactggctgctgaaagaggtcattccgcagttc
ccggacgtgcagatgcgcgtgacccggctggagaacgggccgccggtgggctacccggtg
cagctgcgtgtttccggcgaacacatcgcgcaggtgcaggcgattgcgcgcaaggtggaa
gccaaggtccgcgagaacccgcacgtgatgaacgtcaacctggactggagcgagccgagc
aaggtggtgcggctggtgatcgaccaggaccgtgcgcgcgcgctgggggtgaccagtgcg
caggtgagccagctgctgggcacgtcgctgtcgggcaccagcgtgagcacctaccgtgag
ggcaaccgcctgatcgagatgctgctgcgcgggccggataacgagcgcatccggttggac
atgctgggcagcctggcgattcccacccagagcggcacctcggtgacgctgtcacaggtg
gcgcgcctggagtacgtgttcgaggacggcatcatctggcaccgcaatcgtctgccgacg
gtgacggtgcgcgcggacatcggcgatggcagccaggcgctggacgtggtgcagcagatc
ctgccgacgctggacggcatccgcgcggaactgccgcacggctatctgctggagacgggc
ggcacagtggaggattcggcacgcggccaggattcgatcaaggcgggcatgccgctgttc
ctgatcgtggtggcgaccttgttgatgctgcagctgcgcagcttctcgcgggcggcgatg
gtgctggtgacggccccgttggggatcatcggggcaaccctgttcctgctgctgttccgc
gcaccattcgggttcgtggcgttgctgggcacgatcgcgctggcgggcatgatcatgcgc
aactcggtgatcctgatcgaccagatccagcaggatatcgatgcggggcatgaccgctgg
cacgcgatcatcgacgccacggtgcgccgcttccgcccgatcgtgctgaccgcgctggcg
gcggtgctggcgatgattccgctgtcgcgcagcgcgttctacggctcgatggcgatctcg
atcatgggcggcctgatcgtcggcaccgtgctgaccctggtgttcctgccagcgctgtac
gcggcctggttccgggtgaaacccagcgaggcggaatga
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