Stenotrophomonas oahuensis: PDM29_03660
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Entry
PDM29_03660 CDS
T10110
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou00730
Thiamine metabolism
sou01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PDM29_03660 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sou03009
]
PDM29_03660 (rsgA)
Enzymes [BR:
sou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
PDM29_03660 (rsgA)
Ribosome biogenesis [BR:
sou03009
]
Prokaryotic type
GTPases
PDM29_03660 (rsgA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AIG1
Dynamin_N
Septin
AAA_25
FeoB_N
Guanylate_kin
AAA_33
AAA_29
AAA_22
cobW
VapE-like_dom
AAA_28
AAA_16
DUF4350
TsaE
nSTAND3
PduV-EutP
Roc
Motif
Other DBs
NCBI-ProteinID:
WNH53383
LinkDB
All DBs
Position
complement(839676..840779)
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AA seq
367 aa
AA seq
DB search
MRRMTDPIDYRALQTIGWPWPGAPELPAWQALFEAHPQARPGRVIEQHRTGYVVADAPEA
GLKTESPAEWQRPRFPSHERAAVGDWVLLDGIKIVALLPRRTAIKRGAAGEHYHQQVIAA
NIDTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQTEYSQDALDVLEELAAQ
DIPLLAINGKDPESAGALLPWLGAGQTVVLVGSSGAGKSTLTNTLLGEQRMKTADVRGND
SKGRHTTTHRALMPLPAGACLIDTPGMRELKPTGEEALSESGFADVEALAAQCRFRDCAH
QSEPGCAVRAAIDAGELDEERLLNYFKLKEEVAAAAAKLAVRQAETAQERGKGRGQQFRP
AGKPRRR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggatgaccgacccgatcgattaccgcgccctgcagaccattggctggccctgg
ccgggggcccctgaactgcctgcctggcaggccttgttcgaggcgcacccgcaggcccgc
ccaggccgggtgatcgagcagcaccgtaccggttacgtggtagccgacgccccggaagca
ggcctcaagaccgaatccccggccgaatggcagcgcccgcgctttcccagccacgagcgt
gctgcggtcggcgactgggtgctgctggacggcatcaagattgtcgcgctgctgccccgg
cgcaccgcgatcaagcgcggcgcggccggtgagcattaccaccagcaggtgatcgcggcc
aacattgataccgtgttcatcgtctgtgggctggatgcggacttcaatccgcgtcgcatc
gagcgctacctgctgctggtcggcggtggcggtgcgcagccggtcgtggtgctgaccaag
gccgaccagactgagtacagccaggatgcgttggatgtgctggaggaattggctgcgcag
gatattccgctgctggcgatcaatggcaaggacccggaaagtgccggtgcgctgctgccg
tggctgggcgcgggccagaccgtggtactggtcggttcgtctggagcgggcaaaagcacg
ttgaccaacaccctgctcggcgagcagcggatgaagaccgctgacgtgcgtggcaatgat
tccaagggccgccacaccacgacccaccgcgcactgatgccgttgccggccggggcctgt
ctgatcgacacccccggcatgcgcgaactcaagcccaccggggaagaggcgctgagcgaa
agcggctttgccgatgtcgaagcactggccgcgcagtgccgcttccgcgactgtgcgcat
cagagtgagcccggctgcgccgtgcgtgccgccattgacgccggtgaactggacgaagaa
cgcctgctcaactacttcaagctgaaagaagaagtggctgccgctgccgccaagctggcc
gtgcgccaggctgagaccgctcaggagcgcggcaagggcaggggccagcagttccgcccg
gccggcaagccacgccgtcgctga
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