Stenotrophomonas oahuensis: PDM29_03915
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Entry
PDM29_03915 CDS
T10110
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_03915
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_03915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WNH53434
UniProt:
A0ABY9YR74
LinkDB
All DBs
Position
complement(889599..892469)
Genome browser
AA seq
956 aa
AA seq
DB search
MNTLHHRPLAVAVALCLLVVPALGSAQESPRPTTELDRVDVTGTRIKRAEVEGQVPIQTL
SREQIEQTGLNSIGEVLQQLTGSGSALNAKFNSSGNFGFPPDGSGVGAGSAQVDLRHLGA
KRTLVLVDGIRWVNESSASGVGAATDLNTIPLAIVERIEVLEDGASSLYGSDAIGGVVNI
ITRREFDGGQVTVNYGEYSKGDGTQKGVDLAWGTSGDRYSLFLGASWTKQDPVYASTREQ
SRVPIPGTGLTFGSSATPTGRFMFTDPNTGIAYNITPNSGVTNPTFNGVGGCDRTDDYHC
FATADRFNFAEYNLLLTPSERKGLFGQFRFDITDNVQWYIKALGNRRESTNQAAPEPLFF
GPDGATGNPLADNIVISALNPYNPFGFDLDSSSNLSMVGRRPVEGGARVFEQEVNTQYFA
TGLVGNFEAASRSWYWDVNGMYSKNKAEQTNYGSYDIYKVNMALGDPAVCAATPGCVPLN
IFGGPGTITPAMLQWIQPVVRDRSENELSLFTANLSSDLFNLPAGPVSFATGYEYRKYEG
SYNPDPLTVIGHYNGVPSLPTSGSYDVNEAYLELSVPIFANTEIGSKMDLSLAGRYSDYS
TFGGEFTPKYGLRWQVTNDFVLRTSYAEGFRAPSIGELYGSAARADLQLFDPCSVGLGGT
PPRGSAANCAALGVPTGFQQANSQISVTTGGNPELDPERSRSFSAGFVWSPWFGSNTTWS
ERFDVEVTFYRHHIEGAIQAIDAQTQLDLCVDTLDSVYCDGISRASTGAVSAFNNRLTNL
GSIKTDGWDVDLFWTLPQSDIGQFKIGWQNTFVGRYEALGAAGQRQPQEPGIEVVNSSIP
EWTSNATLGWSLGAWNASWTVRHISELKEQCGDASTFDVCSDQAAGTNTLSATTYHDFQV
GYKIDWMKGLQLSAGLNNAFDKDPPICLSCSLNGYDASTYDIPRGRYWYLRADLRF
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctgcatcaccgccccttggcggttgctgtcgcgttgtgcctgttggttgta
cccgcgcttggcagcgcccaggaatcaccccgccccaccaccgaactggaccgggttgac
gtcaccggcacccgcatcaagcgcgccgaagtcgaaggccaggtgccgatccagaccctc
agccgcgagcagatcgagcagaccggcctgaactccatcggtgaagtgctgcagcagctg
accggttccggctcggccctgaatgccaagttcaactcttccggcaacttcggcttcccc
cccgacggcagcggcgtgggtgcgggttcggcccaggttgacctgcgtcacctcggggcc
aagcgcacgctggtgctggtggacggcatccgctgggtcaacgagtcctccgcctccggc
gtgggcgcggccaccgacctcaacaccatccccctggccatcgtcgagcgcatcgaagtg
cttgaagacggcgcatcctcgctgtacgggtctgacgccattggtggcgtggtcaacatc
atcacccgtcgcgagtttgacggcggccaggtgaccgtgaattacggcgagtacagcaag
ggcgacggcacccagaagggcgttgacctcgcctggggcaccagcggcgaccgctacagc
ctgttcctcggtgccagctggaccaagcaggacccggtgtatgccagcacccgtgagcag
tcacgcgtgccgattcccggcaccggactgaccttcggcagttcggccacgcccaccggg
cgtttcatgttcaccgatcccaacaccggcatcgcctacaacatcacgcctaacagcggg
gtcaccaaccccaccttcaatggcgtgggcggctgtgatcgcaccgacgactaccattgc
ttcgccaccgcggaccgcttcaacttcgccgagtacaacctgctgctgaccccgtccgag
cgcaagggcctcttcggtcagttccgctttgacatcaccgacaacgtgcagtggtacatc
aaggcactgggcaaccgccgcgagtcgaccaaccaggccgcaccagaaccgctgttcttc
gggccggacggtgccaccggcaacccactggctgacaacatcgtcatttccgcactgaac
ccgtacaacccgttcggcttcgacctggattcgtccagcaacttgagcatggtcggccgc
cgcccggttgaaggcggcgcgcgcgtgttcgagcaggaagtgaacacccagtacttcgct
accggcctggtcggcaatttcgaggcggccagccgcagctggtactgggacgtcaacggc
atgtacagcaagaacaaggccgagcagaccaactacggcagctatgacatctacaaggtg
aacatggcgctgggcgaccccgctgtatgcgcggccacgccgggctgcgtgccgctgaac
atcttcggtggcccgggcacgatcaccccggcgatgctgcagtggatccagccggtggtg
cgtgaccgcagcgagaacgagctgagcctgttcaccgccaacctcagcagcgacctgttc
aacctgccggccggcccggtgtcgttcgctaccggctacgagtaccgcaagtacgaaggc
tcctacaaccccgatccgctcacggtgatcggccactacaacggcgtgccctcactgccg
acctctggttcgtatgacgtcaacgaggcctacctggagttgagcgttccgatcttcgcc
aacaccgagatcggctcgaagatggacctgagcctggccggacgctactcggactactcc
acctttggtggcgagttcacgcccaagtacggcctgcgttggcaggtgaccaacgacttc
gtgctgcgcaccagctatgcggaaggcttccgtgcaccgtccatcggtgagctgtacggc
tcggcggcgcgtgccgacctgcagctgttcgatccctgctcggtgggcctgggcgggaca
ccgccgcgtggcagcgcggccaactgcgccgcgctgggtgtgccgaccggcttccagcaa
gcgaactcgcagatctcggtcaccaccggtggcaaccccgaactggacccggagcgttcg
cgcagcttcagtgccggcttcgtgtggagcccgtggttcggcagcaacaccacatggtcc
gagcgcttcgatgtggaagtgactttctatcgccaccacattgaaggggcgatccaggcc
atcgacgcacagacccagctggatctgtgcgtggacacgctggattcggtgtactgcgat
ggcatcagccgcgccagcaccggcgcggtcagcgccttcaacaaccgcctgaccaacctc
ggttcgatcaagaccgacggctgggatgtggacctgttctggacgctgccgcagagcgac
atcggccagttcaagatcggctggcagaacacgttcgtgggccgctatgaggcgctgggt
gcggccgggcaacggcagccgcaggaaccgggtatcgaggtggtgaacagctcgattccg
gaatggaccagcaacgcaacgctgggctggagcctgggcgcttggaatgcatcgtggaca
gtgcggcacatttccgagctgaaggaacagtgcggcgatgcgtcgaccttcgacgtttgc
agtgaccaggcggcaggcaccaacacgttgtcggccaccacgtatcacgacttccaggtc
ggctataagatcgactggatgaaggggctgcagctgagtgcgggtctgaacaacgccttc
gacaaggatccgccgatctgcctgtcgtgctcgttgaacgggtatgacgcgtccacgtat
gacattccgcgtgggcgttactggtacctgcgcgcggacctgcggttctga
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