Stenotrophomonas oahuensis: PDM29_03935
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Entry
PDM29_03935 CDS
T10110
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
sou Stenotrophomonas oahuensis
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
WNH53438
UniProt:
A0ABY9YTE0
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All DBs
Position
complement(896476..899454)
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AA seq
992 aa
AA seq
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MCSRIALQRHPLAISTGHALRMVCSAALIAASAPVWAGCDNNSAPTAGQTVTCTPGAPNP
QTTPVVSVVGSATITLNVQSGAQLAVPTGGAVLFDGGGGHVITNDGTISTAAGIAIVSNQ
ATRVVNRGTISGTTGAIITGAGADQLEMLGGTITGAVLQGGGDDVATIRDGTMTSLDQGD
GQDALSVSGGTIAGTVQQGAGIDSFVMTGGTIGALLQGDGLDTFRMTGGRIVGAFDDGDY
AEMTAGRIGRVNMKLEDNTFLMSGGTIDGNLVTGFGNDTIVLSDGYIGGNISVSGGDDKV
TITGGTVRGEIRLSFGNDRLDWDGGGVVHGLVDFGEGDDIATLTSLNVSHLGALPGFDAG
LGTDTLVMNNVKTNGVARFSGWESVALTNDSQMTFDGTLKLGDTGTGSGRLDVDATSVLY
GGGGSNGIEAFNAALPVNVASAGRIDLSNGGSSTGDRFTIAGNYVGNGGALYLQTVLGDD
SSASDRLVISNGVASGTTGIGILNVGGAGAATTADGIMVVQALNGGSTTANAFALYNPVA
AGAFEYFLFKGGVSAGSGENWYLRSTLVNGGAAAAAAPPLGLGSVTPAPPAPDALGTPPP
DLAPPPSPDLPENPDPLAAEPAPPPEPAAPPDVPPAAEEPPPPVPTIAAALPGPLAAPPT
PGARPAEGDIIPLYRLETGLYSVLPPLLREMGTASLGTFHERHGEQRILAGQGGIRATWA
RLVGQSHQQHWKGDAHPGFDGDLVGIQAGLDLYANADDSHRDQFGLFVGRTRAQGNVTGL
AIGWENVAVGRTRLDDKHLGAYWTSVGSAGGYLDVVVMQSRYDGDATSSRGLGIDFEGDG
TTASLEVGKPMLQFGESAWWLEPQAQVIWQRSSLDDAQDRVSPLRFSSDNAWTGRLGVRL
SGDYDIAGYGWQPYFKLNYWQVLDGQDRIDFGGDVIRNDQDSRALEIGLGVVARFNANVS
AFAVADYTRDLESDAQKERKVIEGNIGLRYDF
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccaggatcgcgttgcagcggcacccgttggccatcagtaccggccacgccctt
cgaatggtctgcagtgccgccttgatcgccgccagcgcgccggtctgggcaggctgcgac
aacaacagcgcccccaccgccggccagaccgtcacctgcacccccggtgcgcccaacccg
cagaccactcccgtggtgagcgtggtggggtcggccacgatcaccctgaacgtgcagtcc
ggcgcacagctggcggtgcccaccggcggcgcggtgctgttcgacggcggtggcggacat
gtgatcaccaacgacggcaccatcagcaccgctgcgggcattgcgatcgtgtccaaccag
gccacccgcgtggtcaaccgcggcacgatcagcggtaccaccggagccatcatcaccggg
gccggggctgaccagctggagatgctgggcggcaccatcaccggtgcagtactgcagggc
ggcggcgacgacgtggccaccatacgcgacggcaccatgaccagcctcgatcagggcgat
gggcaggacgcgctcagcgtcagcggtggcaccatcgccggcacggtgcagcagggggct
ggcatcgacagtttcgtgatgacgggcggcaccatcggtgcgctgctgcagggcgacgga
ctggatacgttccggatgaccggcggacgtatcgtcggcgccttcgatgacggtgattac
gctgagatgaccgcaggacggatcggtcgcgtcaacatgaagctggaagacaataccttc
ctgatgtccggtggaaccattgatgggaatctggtcaccgggttcggcaacgacacgatc
gtgctgtccgacggttacatcggcggcaacatcagtgtgagcggcggggacgacaaggtc
accatcaccggtggcaccgtgcgcggagaaatccggctgagtttcggcaatgaccgtctg
gactgggacggtggcggtgttgtgcacggtctcgtcgactttggcgagggcgacgacatc
gcgacgctcaccagcctcaatgtgtcgcatctgggcgcgctgcccggtttcgatgccggg
ctgggcaccgacacgctggtgatgaataacgtaaagacgaacggcgtggcgcggttctcc
ggatgggagtcggtggcgctgaccaacgacagccagatgacgttcgacgggacattgaag
ctgggcgataccggcacaggatccggccgcctggacgtggatgccaccagcgtcctttac
gggggcggtggcagcaacggcattgaggcgttcaacgccgcattgcccgtcaatgttgcc
agcgcaggccggatcgacctgagcaacggcggaagcagcaccggagaccgctttacgata
gcggggaactacgtcggcaatggcggcgcgttgtacctgcagaccgtactgggcgacgac
agttcagcctcggaccggctggtgatcagcaacggcgtggccagcggcacgaccggcatt
ggcatcctcaacgtgggcggggcgggtgcagccaccacggcggacggcattatggtggtg
caggcgttgaacggtggcagtaccacggccaatgcctttgcgctgtacaacccggttgcg
gccggcgcattcgagtatttcctgttcaaagggggcgtgagcgcaggcagcggcgagaac
tggtacctgcgttcgacgctggtcaacggaggggccgccgccgcagcggccccgccgctc
ggtctgggctcggtgacgccggcaccccccgcaccggacgcgctgggtacgccgccgccg
gacctggccccacccccgtcaccagacctacccgagaatccagacccgctggccgccgaa
ccggcaccgcccccggaaccggcagcaccaccggacgtgcctcccgctgccgaagagccg
cccccgccggtgccgaccattgcagccgccctgcctggaccgttggccgcaccgcccacc
ccgggtgcgcgcccagctgagggtgacatcattcccctctaccgcctggaaaccgggctc
tattccgtgttgccgccgctgctgcgcgagatgggtacggccagcctgggtacgttccat
gagcggcacggtgaacagcgcattctggctgggcagggcgggatccgcgccacgtgggcg
cgactggttggccaaagtcatcagcagcattggaaaggcgacgcacaccccggtttcgat
ggcgatctggtgggaatccaggcaggactggatctgtatgccaatgccgatgacagccat
cgcgatcagttcgggctgttcgtcggtcgcacccgtgcccagggcaacgtcactggcctt
gccatcggttgggagaatgttgccgttggccgcacgcgtctggatgacaagcatctgggc
gcatactggacgagtgtcggcagtgcgggcggttacctggacgtggtggtgatgcagagc
cgttacgatggcgacgccacgtcgtcacgcggattgggcattgattttgaaggtgatggc
accaccgcatcgcttgaagtgggaaagccgatgctgcagttcggcgaatccgcctggtgg
ttggagccgcaggcgcaggtgatctggcagcgcagctcgctggacgatgcacaggaccgg
gtgtcacccctgcgtttctcaagtgacaacgcgtggaccgggcgactgggcgtgcgcttg
tctggagactatgacattgcaggctacggttggcagccttacttcaaactcaattactgg
caggtactggatggccaggatcgcatcgactttggtggcgacgtgatccgcaacgatcag
gattcgcgcgcgctggagatcgggctgggcgtggtggcgcgcttcaacgccaacgtcagt
gcgtttgccgtggccgactacacccgcgatctggaaagtgacgcacagaaggagcgcaag
gtgatcgaaggcaacatcgggctgcgctacgacttctga
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