Stenotrophomonas oahuensis: PDM29_04635
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Entry
PDM29_04635 CDS
T10110
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou00540
Lipopolysaccharide biosynthesis
sou01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PDM29_04635
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sou01005
]
PDM29_04635
Enzymes [BR:
sou01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
PDM29_04635
Lipopolysaccharide biosynthesis proteins [BR:
sou01005
]
Core region
PDM29_04635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
WNH53573
LinkDB
All DBs
Position
complement(1048318..1049523)
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AA seq
401 aa
AA seq
DB search
MSTTDGGSAGYYLLVLLSMIVLAVVRPTQVGQRWCDNRREYVWMEAAMGVMLVGVLTSLL
VHGLWKGSEVEKAVRFFSVGLILAAALRIPRAVLAHAVFGLMLGIWYAVINLGWLVVKSG
GARPATTQFNTVTYGDLTLLFSVLAFVMMGVRITRFRRTEFAFKLITGIAGVAGFVATQT
RGGLLAIPFFLFVGLLIQGRRMNRFKVLASVLLLGTAGAIVASDASMRERIELGVNEFDQ
CQVAHLADTSVCIRLQLWRAAGHMIHSEPVFGVGGGDRFREELAQLATEGQVTPMVARDF
GETHNDLLYFLATYGVLGGLGLLLLYFAPGWVFARRLRLSMTDRTTRLFAGAGLMICVGY
VVFGLTEMMFRDMRSASFYATWMALFLALSDPLRLRDPTSR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactaccgacggcggcagcgcggggtactacctgctggtgctgctgagcatgatc
gtgctggcagtagtgcgccccacgcaggtcggccagcgctggtgcgacaaccgtcgcgag
tatgtgtggatggaggcggccatgggcgtgatgctggtgggcgtgctcaccagcctgctg
gtacatgggctatggaagggctcggaagtagaaaaggccgtccgcttcttcagcgtcggc
ctgattctcgcggccgccctgcgcattccgcgtgcggtgttggcgcatgccgtgttcggg
ctgatgctgggcatctggtacgcggtgatcaatctgggctggctggtggtgaaatccggt
ggtgcgcgaccggccaccacccagttcaatacggtcacctatggcgacctgaccctgctg
ttctcggtgctggccttcgtgatgatgggcgtgcgcatcacccgtttccgtcgcaccgag
ttcgccttcaagctcattaccggtatcgcgggtgtagccggctttgtggccacacagacc
cgcggcgggctgctggccattccattcttcctgttcgtcggactactgatccagggccgg
cgcatgaaccgcttcaaggtactggcttcggtgctgctgctgggcaccgccggtgcgatc
gtggccagcgatgcgtcgatgcgcgagcgcatcgagttgggcgtgaacgaattcgaccag
tgccaggtcgcgcacctggccgatacctcggtgtgcatccggctgcagttgtggcgtgcg
gccgggcacatgatccacagcgagccggtattcggcgtgggcggtggcgaccgtttccgc
gaagaactggcgcagttggccactgaaggccaggtcacgccgatggtcgcccgcgacttt
ggcgagacccacaacgacctgctgtacttcctggccacctatggggtgctgggcggattg
ggcctgctgctgctgtacttcgcccccggctgggtgttcgcgcgccgcctgcggctgtcg
atgaccgaccgcaccacgcgcctgttcgccggcgcgggcttgatgatctgcgtcggctac
gtggtgtttggcctgaccgagatgatgttccgcgacatgcgcagcgcgtcgttctacgcg
acctggatggcgctgttcctggcgctgtcagacccgctcaggctgcgtgatcccacgtcc
cgctga
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