Stenotrophomonas oahuensis: PDM29_04735
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Entry
PDM29_04735 CDS
T10110
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PDM29_04735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sou03400
]
PDM29_04735
Enzymes [BR:
sou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PDM29_04735
DNA repair and recombination proteins [BR:
sou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PDM29_04735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
WNH53591
LinkDB
All DBs
Position
1070682..1072928
Genome browser
AA seq
748 aa
AA seq
DB search
MSSAPAAPVLSLESAPAPAPGAPTVQVALPLPLPQLFDYAPPPGSLAGADSIGRRVRVPF
GSRELVGVVAGVGCADADTLLRDAREWLDPVPLLDGEVWRSLQWLARYTHAPLGEVVSTA
LPAPLRRGEPVPDTHRWGWRLTADGDAQRVRQRAGTRPQRLCQLLADAAGRGTALDEDQL
DDLMDDWRSAARALAKRGLVERMAQVHVAPVPMLGAGPVPNAEQADAVAAITGGTGFGTF
LLDGVTGSGKTEVYLQAIAACLARGRQALVLVPEIGLTPQTLARFRTRLGIPVHVLHSGL
NDNERARVWAAATRGEAQVIVGTRSAVFTPLPNAGLIVVDEEHDGSYKQQDGIRYHARDF
ALVRAKALDIPVVLGSATPSLESLHNARSGRYVHLRLKQRAGEARPPRVRVLDVRKRPLR
DGLSPEVLEGIAEHLQRGHQVLVFKNRRGYAPVLLCHDCGWTAPCRRCDAPMTVHAGGRR
LQCHHCGARQPAPLACPDCGSLALQPQGIGTERLEEHLGEAFADYPVIRIDRGTTNRRDA
LESQLARLGDQPGILVGTQILAKGHDLPRLTLVVVVGIDEGLFSADFRASEKLAQQLIQV
AGRAGRATDPGEVWLQTHHPGHPLLETLVHGGYHAFADAELQQRDAAGFPPFAYLALLRA
EAQQVEHANAMLTAVRGLIAEDAPVERFGPMPAPMPRRAGYQRTQLLLSAPRRQPLHAVL
DAMVPRIHGLPEARKVRWSLDVDPMDLY
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcacctgcggcccctgtcctgtccctggaaagcgccccggcccccgcgcct
ggggcgccaaccgtgcaggtcgccctgccgctgccgctgccccagctgttcgactatgca
ccgccccccggctccctggccggagcggacagcatcggccgccgggtgcgggtgccgttc
ggctcgcgcgaactggtcggggtggtggccggtgtgggctgcgctgatgccgataccctc
ctgcgcgacgcccgcgaatggctggacccggtgccgctgctcgacggcgaggtgtggcgg
tcgctgcagtggctggcgcgctacacccacgcgccgctgggcgaggtggtgagcacggcg
ctgccggcccccctgcgccgcggcgagccggtgcccgacacccaccgctggggctggcgg
ctgaccgccgacggcgacgcgcaacgggtgcgccagcgcgccggcacccggccgcagcgc
ctgtgccagttgctggccgacgccgccggtcgcggtaccgcgctggatgaggaccagctg
gacgacctgatggatgactggcgcagcgccgcgcgcgcgctggccaaacgcgggctggtc
gaacggatggcacaggtccatgtcgccccggtgccgatgctgggcgctggcccggtgccc
aatgccgagcaggccgatgctgtcgccgccattaccggtggcaccggttttggcacgttc
ctgctggacggtgtcaccggcagcggcaagaccgaggtttacctgcaggccatcgccgcc
tgcctggcgcgcggacgacaggcgctggtgctggtgccggagatcgggctcacgccgcag
acgctggcgcgcttccgcacccggctgggcattcccgtgcatgtgctgcattcgggcctg
aatgacaacgagcgtgcccgggtctgggccgcggcaacgcgcggcgaggcccaggtgatt
gtcggcacacgctcagcggtgttcaccccgctgcccaatgccggcctgatcgtggtcgac
gaggagcacgacggcagctacaagcagcaggacggtatccgctaccacgcccgcgatttc
gccctggtccgggcgaaggcgctggacatcccggtggtgctgggcagtgccacgccgtca
ctggagtcgctgcacaacgcgcgcagcggtcggtacgtgcatctgcggctgaagcaacgt
gccggcgaggcccgcccgccgcgtgtgcgcgtgctcgatgtgcgcaagcgtccgctgcgc
gatggcctgtcgccggaagtgctggaaggcattgccgaacatctgcagcgtggccatcag
gtgctggtgttcaagaaccgacgtggctacgcaccggtgctgctgtgccatgactgtggc
tggaccgcgccctgccggcgctgcgacgcgccgatgacagtgcacgccggcggccggcgg
ctgcagtgtcaccactgcggcgcgcgccagccggccccgttggcctgcccggattgcggc
agcctggcgctgcaaccgcagggcatcggcaccgagcgcctggaagaacacctgggcgag
gccttcgcagactacccggtgatccggatcgatcgtggcaccacgaaccgtcgggatgcg
ctggaatcgcaactggcgcggctgggcgaccagccgggcattctggtcggcacgcagatc
ctcgccaaaggtcacgacctccccaggctcactctggtggtggtggtgggcatcgacgaa
ggactgttctcggccgacttccgcgccagcgagaaactggcccagcaactgatccaggtg
gcgggccgcgctggccgcgccaccgaccccggcgaggtctggctgcagacccaccacccc
gggcaccccttgctggaaacgctggtgcacggcggctaccacgcctttgccgatgccgag
ctgcagcagcgcgatgccgccggcttcccgccgttcgcgtatctggccctgctgcgcgcg
gaggcgcagcaggtagagcatgccaatgccatgctcaccgccgtgcgcggcttgattgcc
gaagatgcgccagtggagcggttcggaccgatgcccgcgccgatgccgcgccgggcgggg
tatcagcgcacccagttgctgttgtccgcgcccagacggcagccattgcatgcagtgctg
gatgcgatggtgccgcggattcatgggttgccggaggcacggaaggtgcggtggtctctt
gatgtcgatccgatggatctgtattga
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